Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20furfur_20[genbank_20GCA_5F001265065.1_202015-08-11] 2,092 sequences; 7,790,619 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1550 150 4e-31 seq1796 132 1e-25 seq1597 113 1e-19 seq1665 86.0 2e-11 >seq1550 Length=26160 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || ||||| || || ||||| ||||||||||| || || ||| Sbjct 24109 CAAGTGTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTCGAGGTCGAGTCGTCGGAC 24168 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| || || ||||| |||||||| || || || ||||||||||| || Sbjct 24169 ACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 24228 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || || ||| || ||| || Sbjct 24229 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACGCTCAGCGACTACAACATC 24288 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| ||||| Sbjct 24289 CAGAAGGAGTCGACGCTGCACCTTGT 24314 >seq1796 Length=1778 Score = 132 bits (146), Expect = 1e-25 Identities = 120/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987 ||||||| || || || |||||||| ||||| || |||||||| || ||| ||||| | Sbjct 175 TTTTCGTTAAGACCCTGACAGGAAAGACGATTACGCTCGAGGTCGAGTCCTCGGACACGA 116 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 ||||||||||||| ||||| |||||||| || || || || ||||||||||| || | Sbjct 115 TCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCC 56 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 ||||||| || || || ||||| || ||||| Sbjct 55 TTATCTTTGCTGGCAAGCAGCTTGAGGATGG 25 >seq1597 Length=2736 Score = 113 bits (124), Expect = 1e-19 Identities = 151/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| ||| | || || ||||| || || |||||||| |||||||| || ||| Sbjct 504 CAAATCTTCATCAAGACGCTCACGGGCAAGACGATCACGCTCGAGGTCGAGTCGAGC--- 448 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||| |||||| ||| | |||||||| || || ||||| ||||||||| Sbjct 447 GACACGATCGACGTCGTCAAGTCCAAGGTCCAGGACAAGGAGGGTATCCCCCCGGACCAG 388 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || || || |||||||| || || | || || ||| || ||| Sbjct 387 CAGCGGCTCATCTTTGCGGGCAAGCAGCTCGAGGACGGCCGCACGCTCAGCGACTACAAC 328 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 327 ATCCAGAAGGAGTCGACGCTCCACCTGGT 299 >seq1665 Length=2274 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| ||||| || || || ||||| ||||||||||| || || ||||| ||||| || Sbjct 307 AAGATCCAGGATAAGGAGGGCATCCCGCCGGACCAGCAGCGTCTCATCTTTGCCGGCAAG 366 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| || || | || || ||| || ||| |||| || || || || ||||| Sbjct 367 CAGCTCGAGGACGGGCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCGACGCTGCAC 426 Query 178125 CTTGT 178129 || || Sbjct 427 CTCGT 431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203698935489848