Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq38 127 2e-24 seq57 123 3e-23 seq37 111 2e-19 >seq38 Length=383934 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 ||||| || |||||| ||||| ||||| ||| |||||| || | || || |||||| Sbjct 105134 TGCAAGGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTGCGGCCATCCTCGAGCTGC 105193 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 ||||||||||| || || ||||| ||||| | || | | |||||||||| ||| | || Sbjct 105194 TTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC-TGAATCTT 105252 Query 43101 TG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | |||| || | | |||||| ||||||||| |||| ||||| || |||||||| Sbjct 105253 CGCCTTGACATTCTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTCTTGCCCGT 105312 Query 43160 TAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || || | |||||| Sbjct 105313 CAGGGTCTTGACGAACACTTGCAT 105336 >seq57 Length=38780 Score = 123 bits (136), Expect = 3e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | |||||| || | |||||||| |||||||||||||| || Sbjct 33248 CCACCGCGTAGACGTAGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTGTAGTCGCTT 33189 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || ||||| ||||| ||||| || || || || || || | ||| Sbjct 33188 AGTGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGGG 33129 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCC-ACCGTGTCGCTCGATTCCA 43134 | || ||||||||| ||| |||| | |||| ||| | | | |||||||| ||| | Sbjct 33128 ATGCCTTCCTTGTCC-TGAATTTTGGCCTTGA-CGTTGTCGATGGTGTCGCTACTTTCGA 33071 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||| |||||||||||| ||||| || || || ||||| || ||||| Sbjct 33070 CTTCGAGCGTGATGGTTTTTCCCGTGAGGGTTTTCACAAAAATCTGCAT 33022 >seq37 Length=924257 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||| |||||| || |||| || ||||||||||||||||| Sbjct 109782 CTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAA 109723 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||| ||||| | || | || |||||||||| ||| | || | || | Sbjct 109722 GATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTCACAT 109664 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || || || |||| |||||| || ||||| || | ||||| | Sbjct 109663 TGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAAGGTCTTGA 109604 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 109603 CGAAGATTTGCAT 109591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816828046240