Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq54 95.1 1e-14 seq57 91.5 1e-13 >seq54 Length=97197 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 52836 AGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGG 52895 ||||||||| || || || | || || || || ||||| | || || || | | || Sbjct 36754 AGAGGCCGTTGATATCGAGCAGGACTTCTTGACAGACGCGCTCCCTGTCTCGCTCATTGG 36813 Query 52896 CATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCA 52955 ||||| || | |||||||| | ||||| |||||||||||||| | || | || Sbjct 36814 TATGAATGCTAGGCTGATGTGCCAATACATTGAGTTTGTTGCGGATCGCCTTCTTGTGGC 36873 Query 52956 GCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATC 53015 || ||| | ||||| |||| || || ||||| || |||||| | ||||| || Sbjct 36874 TCTGGGTAACCCGAAGCACTACAACTCGACAAACCCATTCGACTTTATGGAGAACATTTC 36933 Query 53016 GCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTA 53060 |||| | ||||| | || || || ||| | ||||||||||| || Sbjct 36934 GCTCCAAGGCAAGTCGAATTTCTTTGAGCGCCGTGTGGGCGACTA 36978 >seq57 Length=38780 Score = 91.5 bits (100), Expect = 1e-13 Identities = 108/145 (74%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||| ||| | || ||||||| || |||||||||||| || || ||||| Sbjct 33249 GCCACCGCGTAGACGTAGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTGTAGTCGCT 33190 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||||| ||||| ||||||||||| || | || || ||||| ||||| || || Sbjct 33189 TAGTGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGG 33130 Query 139657 TATGCCTTCTTTGTCGGTGATTTTT 139681 |||||||| ||||| ||| |||| Sbjct 33129 GATGCCTTCCTTGTC-CTGAATTTT 33106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063330313600