Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq54 235 1e-56 >seq54 Length=97197 Score = 235 bits (260), Expect = 1e-56 Identities = 604/908 (67%), Gaps = 24/908 (3%) Strand=Plus/Minus Query 363415 TCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGT 363474 || ||||| | || || ||||| | | | |||||| || ||||| ||| | |||||| Sbjct 20538 TCTTACCTCTTGCGCATTAATGGAAAAGTGGCTGAACGGCCTCAGCACATGCTCATGCGT 20479 Query 363475 GTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTC-T 363533 || ||| |||| || || | || | || || ||||| ||||| || || | | Sbjct 20478 GTCGCTGTTGGCATTCACGGTGAAGACATAGAAAGTGCCATTGAGACATACAA-CTACAT 20420 Query 363534 AAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCC 363593 || | |||||| || || |||| || ||| ||||||||| || | | |||| Sbjct 20419 GTCTGAAAAGGCATTCACACATGCATCGCCGACTCTGTTCAATGCTGGCACGCCTCATCC 20360 Query 363594 ACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGA 363653 || ||||| || ||||| | | ||||| || || || || |||||||| | || Sbjct 20359 GCAAATGTCGTCGTGCTTCTTGGTGTCTATGAAAGAAGACTCTATTGAGGGTATTTACGA 20300 Query 363654 CACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCA 363713 ||| || |||| |||||| | || ||||| || || || || ||| || ||||| Sbjct 20299 CACTCTCAAGACGTGTGCTATGATAAGCAAGACGGCTGGTGGCATCGGTCTAAACATCCA 20240 Query 363714 CAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGGA-TACTCGAATGGGCTG 363771 |||| | |||| |||| | |||||| ||||| ||| || | ||||| | Sbjct 20239 CAATATCCGTGGTACAGG-CTCATACATTGCTGGCACGAATGGAGTAAGC-AATGGAATT 20182 Query 363772 GTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831 || ||||||||||| || || |||| || || | |||||||||||||| || || Sbjct 20181 GTGCCCATGCTTCGAGTTTTCAACAACACGGCTCGTTACGTCGACCAGGGCGGCAACAAA 20122 Query 363832 CGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTT 363891 || ||| |||||||| || ||||| ||||| || | ||| | ||||| || | Sbjct 20121 CGACCAGGTGCGTTTGCCATTTATCTGGAGCCGTGGCACCCTGATGTGTTTGAATTCGTG 20062 Query 363892 GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTT 363951 || || || ||||| ||||| || || | || ||||| ||| ||||| || | Sbjct 20061 GATCTTCGTAAAAATCATGGAAAGGACGAGGTTCGCGCACGCGATTTGTTCCTGGCCATG 20002 Query 363952 TGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGC 364011 ||||| | |||| ||| |||||||| || ||| | || ||||||| || | || Sbjct 20001 TGGGTGCCAGACCTTTTCATGAAGCGTGTTGAGAAGAATGAGGATTGGTCTCTTATGTGT 19942 Query 364012 CCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAA 364071 ||| ||| ||||||||| | ||| | || || || | | | || || ||| Sbjct 19941 CCAGCTGAAGCACCAGGTCTTGCTGATTGCTACGGCGAGGAGTTCGAAGAGCTTTATGAA 19882 Query 364072 AAGTATGAATCGGAGGGAAAGGCTCGT--AAGACAATTC----CCGCACAGAAGCTATGG 364125 ||| ||| | ||| |||| || || || | || |||||||| ||| Sbjct 19881 CGTTAT------GAGCGTGAGGGTCGTGCAAAACGATCCGTCAAGGCCCAGAAGCTGTGG 19828 Query 364126 TTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCG 364185 | |||||| |||| | || || ||||| || | || | ||||| ||||||||| || Sbjct 19827 TATGCCATTCTGGAGGCTCAAATAGAGACGGGCAATCCGTTCATGTTATACAAAGATGCG 19768 Query 364186 TGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAG---CAACCTATGT 364242 ||||||||| || ||| || |||| || || | ||| |||| ||| || ||| Sbjct 19767 GCCAACCGCAAAAGTAATCAGAAGAACCTCGGCACGA-TCA--AGAGCTCCAATCTCTGT 19711 Query 364243 ACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATC 364302 ||||| || || ||||||| | || || ||||| || || |||||||| || || || Sbjct 19710 ACCGAAATCATGGAATACAGTTCGCCAGAGGAGACAGCAGTGTGTAACCTAGCCTCTATT 19651 Query 364303 GCGCTTCC 364310 || || || Sbjct 19650 GCACTGCC 19643 Score = 98.7 bits (108), Expect = 3e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 22480 TCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA 22539 || ||| | || || ||| |||| ||||||| ||| || ||||| || || || || || Sbjct 36530 TCGTTCTCAGAGCGCCTTGTTGCCTTTGCTGCGGTCGAGGGCATCTTTTTCTCGGGCTCA 36589 Query 22540 TTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAAT 22599 || | | ||||| ||||| || ||||||| | ||||| ||||| |||| || ||| Sbjct 36590 TTCGCTTCCATCTTCTGGCTCAAGAAACGTGGCCTCATGCCTGGTCTGTCGTTCTCCAAT 36649 Query 22600 GAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 ||| | ||| || || || || ||||||||||| ||||| || Sbjct 36650 GAGCTCATTTCTCGTGACGAAGGCCTTCATACCGACTTTGCATG 36693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351796484456