Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq57 120 3e-22 seq37 102 7e-17 seq38 93.3 4e-14 >seq57 Length=38780 Score = 120 bits (132), Expect = 3e-22 Identities = 169/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGA--GTCGT 25056 ||||| || ||||| || || | || || ||| ||||||| ||||||| || || | Sbjct 33022 ATGCAGATTTTTGTGAAAACCCTCACGGGAAAAACCATCACGCTCGAAGTCGAAAGTAGC 33081 Query 25057 CTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 ||||| ||||| |||| | || |||| ||| ||||| ||||| || || ||| Sbjct 33082 --GACACCATCGACAACGTCA---AGGCCAAAATTCAG-GACAAGGAAGGCATCCCGCCT 33135 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 || ||||| || ||||||| ||||| ||||| | ||||||| ||||| | |||| Sbjct 33136 GATCAACAACGCCTTATTTTCGCCGGTAAACAGCTTGAAGATGGCCGCACACTAAGCGAC 33195 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||||||||| ||| || || || |||||| | ||| | || || Sbjct 33196 TACAATATTCAAAAAGAGAGCACTCTTCACTTGGTGCTACGTCTACGCGGTGG 33248 >seq37 Length=924257 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| || || | ||||| |||| || ||||| || Sbjct 109591 ATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 109650 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || ||||| | || | ||| ||||| || || ||||| || ||||| Sbjct 109651 GACACGATTGACAATGTGAAGGCCAAGATTCAG-GACAAGGAGGGCATTCCTCCGGACCA 109709 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || || || || | ||||| | ||||||| || | || ||||| Sbjct 109710 ACAGCGTCTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGAGTGACTACAA 109769 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 109770 CATCCAGAAGGAGTCGACCCTTCACCTGGTGCT 109802 >seq38 Length=383934 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| |||| || || | ||||| |||| ||||| ||||| Sbjct 105336 ATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCG 105277 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 105276 GACACGATTGAGAATGTCAAGGCGAAGATTCAG-GACAAGGAGGGTATTCCTCCGGACCA 105218 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || || || || | || |||| |||||| || | || ||||| Sbjct 105217 ACAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTCTGAGTGACTACAA 105158 Query 25178 TATTCAAAAAGAATCCAC 25195 ||||| || || || || Sbjct 105157 CATTCAGAAGGAGTCGAC 105140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327429632020