Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq54 176 5e-39 >seq54 Length=97197 Score = 176 bits (194), Expect = 5e-39 Identities = 398/594 (67%), Gaps = 7/594 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| |||||||||||||| | |||||||| || || || | ||||||| ||| | | Sbjct 36694 GCATGCAAAGTCGGTATGAAGGCCTTCGTCACGAGAAATGAGCTCATTGGAGAACGACAG 36635 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || |||||||||||||| || || ||||| || || || ||||| Sbjct 36634 ACCAGGCATGAGGCCACGTTTCTTGAGCCAGAAGATGGAAGCGAATGAGCCCGAGAAAAA 36575 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC--GGAATTACTG 93268 || || || || || ||||| || |||| || || | || || || | | | Sbjct 36574 GATGCCCTCGACCGCAGCAAAGGCAACAAGGCGCTCTGAGAACGAGGCACGGTGGT-CAG 36516 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 |||||| || |||||| || || || | ||| | || | || || ||||| Sbjct 36515 A-GATCCAGCGTAGAGCCCAGTCAGCCTTCTGCTTGACGACTGGCACAGTCTCAATAGCA 36457 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 || |||| | || || || | || || ||||| || || || | || || || Sbjct 36456 TTGAATAAAAAGTCGCGGCGTTCAGGCTCGCGAATGTACGTGTCAATAAGAAGCGAGTAG 36397 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 ||||||| |||| || ||||| || ||||| || ||||| || | || || ||| Sbjct 36396 GTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAGAAGCAACGTGCCTCAGTG 36337 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 ||| ||||| | || | ||| || ||||| || ||||| |||||||| ||||| Sbjct 36336 GCCTGGACTTCGGCACTGAACCGCTCGACCAGATTCTCGTTGACAATACCATCTGATGCA 36277 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCC 93565 || || || || | || ||| | | ||| || ||| || | | | || ||| Sbjct 36276 GCGAAGAACGCAAGTACATGGCTCACAAAGTGACGCTCGGGGTCCGTCATCCGATTGTCC 36217 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || ||| | || || || || | || | ||| ||| | |||||||| ||||||||||| Sbjct 36216 CAGTCGTACAGGTCCTTGGACAAGTCAATTTCCTCGGCCGTCCAAAATGATGCTTCTGCC 36157 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGA 93679 || |||||||| | ||| || || || || | || || || | |||||| ||| Sbjct 36156 TTCTTGTACATTTGCCAGATTTCATGGTAACGGATCGGGAACAGGACAAAGCGA 36103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860048237920