Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq48 109 1e-18 seq54 91.5 3e-13 seq37 91.5 3e-13 >seq48 Length=724325 Score = 109 bits (120), Expect = 1e-18 Identities = 403/624 (65%), Gaps = 8/624 (1%) Strand=Plus/Minus Query 218486 TGGACCAGTCGAAG-ACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTT 218544 ||||||| ||||| | ||||| || || | ||||| || |||||||| | || | Sbjct 84717 TGGACCA-TCGAATCAGAAACATACCGATCTCGGACTTTATTAACAAGGAGTTGATCTTA 84659 Query 218545 TTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCG 218604 |||||| | || || || || ||||| || || ||||| ||||||||| Sbjct 84658 TTCTCGATGGCAGACAATATCCGCTCCATCCCCAGTGTTGTCGATGGACTCAAGCCAGGA 84599 Query 218605 CAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCT 218664 ||||| ||| | ||||| || ||||| || || |||||| |||||| | Sbjct 84598 CAGCGGAAGGTGATCTTTAGTTGTTTTAAGCGCAAGCTCAAGACAGAAATCAAGGTCCAT 84539 Query 218665 CAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAG 218724 || | || ||||| ||||| ||| | || || || || || ||| |||| | Sbjct 84538 CAACTCCAGGGCTATGTGTCCGAGCATTCGGCGTATCACCATGGCGATCAGGCTCTG-AC 84480 Query 218725 GGTGCC-ATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCT 218783 || | || || || | || || |||| | ||||||||||| |||| ||||| | Sbjct 84479 CATGACGATCGTCGGTCTCGCGCAAGACTTTTGCGGCAGTAACAATGTGAATTTGCTCAT 84420 Query 218784 CCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTA 218843 || ||||| || ||||| ||||| ||||||| |||||| || ||| | || Sbjct 84419 GCCGAACGGACAATTTGGCTCTCGAAGCATGGGTGGCAAGGATGCGGCCAGTGCTCGTTA 84360 Query 218844 TATCTTTACAAAGTTGTCGCCCG--TGACGCGCCAGGTGTTCAATCAGGCCGATGATGTG 218901 ||||| || || ||| | || | ||||| | ||||| | || |||||| Sbjct 84359 CATCTT--CACAGCTGTGCCACGGATCACGCGTCTCATGTTCCACGCGGACGATGAACCA 84302 Query 218902 CTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCT 218961 || ||||| ||||| ||||| || || |||||||| || ||||||| ||||| Sbjct 84301 CTGCTTAACTATCTCGAGGATGACGGACAGAGCATTGAGCCAGAATGGTATGCGCCTGTA 84242 Query 218962 ATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATT 219021 | || |||| | ||||| || | |||||||| || || | || || | Sbjct 84241 GTACCACAGGTGCTGCTGAATGGGGCGGAGGGTATCGGTACGGGATGGAGCACGTTTGTG 84182 Query 219022 CCTTCTTACAATCCCAAGGACATCATTGACAACGTCAAGCGTCTCATATCTGGCAAGGAG 219081 || |||||||||| ||| | | |||||| | |||| ||| | ||| | ||| Sbjct 84181 CCCAATTACAATCCCCGGGAAGTTGTCGACAACTTGCGTCGTCGCATGGCCGGCGAAGAG 84122 Query 219082 ATGGTACCGATGTCTCCGTGGTAC 219105 || |||||| || |||||| Sbjct 84121 TATGTGCCGATGAACCCATGGTAC 84098 >seq54 Length=97197 Score = 91.5 bits (100), Expect = 3e-13 Identities = 166/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 293128 ACAAAGGCACCACGATCAGCAGCGAGGTC---AATCACTGTCTTCATAGAGATCTCCCAC 293184 |||||||| |||||||||||||| | || ||||||| ||| || || |||||| Sbjct 18884 ACAAAGGCGCCACGATCAGCAGCCATATCAATAATCACTTTCTGGCTA---ATTTCCCAC 18940 Query 293185 GATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGACCCT 293244 |||||||||| ||||||| | |||||||| | |||||||| ||||| Sbjct 18941 ACAGTCTTGTACAGGGCCTTGATGTGGTCGGGAATGCCAGGTATATTCTGGATCGACCCG 19000 Query 293245 CCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACGAGCAATGAGCTCG 293304 || | ||||| || | | |||||| | || |||| ||| | | | |||||| Sbjct 19001 CCATGTGCAATGATTTTCTGCTTCATCGAATCATTCCAAAGACCAAGTTCCACGAGCTCC 19060 Query 293305 CGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAATG 293364 || | || | | |||||| || ||||||| |||||||| || || |||||||| Sbjct 19061 CGCAAGAGCCACGGGTTGACGACTTGGAACTCGCCAGCGAGGACACGTCGCATGTAAATG 19120 Query 293365 TT 293366 || Sbjct 19121 TT 19122 >seq37 Length=924257 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 |||||| |||| ||||||||||| ||||| ||| || ||||| || ||||| ||||| Sbjct 621567 GGTGTCGTTGGGCCCAATGGTGCAGGTAAAAGTACACTCATCAAGGTGCTGACAGGCGAA 621626 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 | | ||| |||||| || || || || ||| |||| |||| | || Sbjct 621627 ATTGTGCCCAATGAGGGCAAGGTCGAAAAACACCCTAACCTGCGTGTGGCAATGATGGCC 621686 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 || ||||| |||||||| ||||| | ||| |||| | |||| | ||||||||||| Sbjct 621687 CAACACGCATTCCACCATCTCGAGCAGCACTTGGAGAAGACTGCGTGCCAATACATTCGC 621746 Query 280350 TGGCGCTA 280357 ||||| || Sbjct 621747 TGGCGGTA 621754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835377730828