Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq57 179 7e-40 seq38 136 7e-27 seq37 129 1e-24 seq48 89.7 9e-13 seq46 87.8 3e-12 >seq57 Length=38780 Score = 179 bits (198), Expect = 7e-40 Identities = 178/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | |||||||| || ||| ||||||||| || || || ||| Sbjct 33248 CCACCGCGTAGACGTAGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTGTAGTCGCTT 33189 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | ||| || |||||||| || || | |||||| || || || Sbjct 33188 AGTGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGGG 33129 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATT-CTAC 68413 |||||||||||||| ||||| || ||||||||| ||||||||||| ||| || | || Sbjct 33128 ATGCCTTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATGGTGTC-GCTACTTTCGAC 33070 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| | ||||||||||||||||||||||| || || || |||||||| Sbjct 33069 TTCGAGCGTGATGGTTTTTCCCGTGAGGGTTTTCACAAAAATCTGCAT 33022 >seq38 Length=383934 Score = 136 bits (150), Expect = 7e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 ||| | ||| | || ||||| || || ||||| || || || || | ||||| || Sbjct 105127 TACGAGGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTGCGGCCATCCTC 105186 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 | |||||| || ||||| || || | |||||||| || ||||| || |||||||| || Sbjct 105187 GAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 105246 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 |||||| |||||||| ||| || ||||| | ||||| || || | |||||| || || Sbjct 105247 AATCTTCGCCTTGACATTCTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTCTT 105306 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||||||||| | ||||| Sbjct 105307 GCCCGTCAGGGTCTTGACGAACACTTGCAT 105336 >seq37 Length=924257 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || ||||| || |||||||| || || || || | || ||||| Sbjct 109799 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCGTCTTCA 109740 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || ||||| || || | |||||||| || |||||||| |||||||| ||| Sbjct 109739 AGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 109680 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| || || || ||||| | || || || || | ||||| || || Sbjct 109679 ATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTG 109620 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | |||||||||||| || ||||| Sbjct 109619 CCAGTCAAGGTCTTGACGAAGATTTGCAT 109591 >seq48 Length=724325 Score = 89.7 bits (98), Expect = 9e-13 Identities = 125/175 (71%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 225458 GAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGC 225517 || ||||| ||||||||||| |||| | | ||| | ||| |||| | ||| | Sbjct 230405 GAATCGTGAGACACAATGATCGACGTAGCACTTGTCTG---CTTCAGGTAGTTTGTGATC 230461 Query 225518 CATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCA 225577 || |||||||| | || |||| |||||| || || || |||| | |||||||||||| Sbjct 230462 CACGCCACGTTAATTACATCCAAGTGGTTCGTCGGCTCATCCAACAACAGGATGTCAGCC 230521 Query 225578 TCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGG 225632 | | || | ||| |||| || | |||||||| ||||| || || ||||||| Sbjct 230522 TTGAACAGCACGGCACGCGCAAGGGCGAGCTTCATCTTCCAACCACCCGACAGGG 230576 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 224498 AGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGG 224557 ||||| | |||||||| ||||| | ||||||||||||||||||||| | || | ||| Sbjct 229427 AGCGCAGCGAGCGACTCACGGTCCAAGAAGTTCGTCGGCTCATCCAGCACAATGATGTGC 229486 Query 224558 GGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCG 224617 || |||| ||| ||||| | ||| | ||| ||||||||||| || || ||||| Sbjct 229487 GGCATACGCCAGGTGGCAGCACCCAGCACAACCTTGACCTTCTGACCACCCGAAAGGCCA 229546 Query 224618 CGGAT 224622 || || Sbjct 229547 CGCAT 229551 >seq46 Length=206252 Score = 87.8 bits (96), Expect = 3e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||||||||||| |||||||| || || || ||| ||||| ||||| | ||| || || Sbjct 206252 AATGCCTTCCTTATCTTGAATTTTGGCTTTCACGTTGTCGATCGTGTCGGATGACTCGAC 206193 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| ||||| || || | ||||||||||| |||||||| Sbjct 206192 CTCAAGCGTGATTGTTTTGCCTGTCAATGTCTTGACGAAAATCTGCAT 206145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621155809760