Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq54 107 2e-18 >seq54 Length=97197 Score = 107 bits (118), Expect = 2e-18 Identities = 405/633 (64%), Gaps = 2/633 (0%) Strand=Plus/Plus Query 48171 GGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATC 48230 |||||||| | ||||||||||||| || | || | |||| || | ||||| | | Sbjct 19940 GGACACATAAGAGACCAATCCTCATTCTTCTCAACACGCTTCATGAAAAGGTCTGGCACC 19999 Query 48231 CAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGT 48290 || | || | || ||||| | | | | || || || ||| ||| | ||| Sbjct 20000 CACATGGCCAGGAACAAATCGCGTGCGCGAACCTCGTCCTTTCCATGATTTTTACGAAGA 20059 Query 48291 TCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGT 48350 || | || || | | ||||| ||||| || || | ||| || || | |||||||| Sbjct 20060 TCCACGAATTCAAACACATCAGGGTGCCACGGCTCCAGATAAATGGCAAACGCACCTGGT 20119 Query 48351 CGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGG 48410 ||||| || || || || || | || | || || ||||| |||||| | ||| || Sbjct 20120 CGTTTGTTGCCGCCCTGGTCGACGTAACGAGCCGTGTTGTTGAAAACTCGAAGCATGGGC 20179 Query 48411 ACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA 48470 ||||| ||||| || ||||| || || | ||| || || || | | ||||| Sbjct 20180 ACAATTCCATTGCTTACTCCATTCGTGCCAGCAATGTATGAGCCTGTACCACGGATATTG 20239 Query 48471 CTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTA 48530 || | ||| || ||||| ||| | || ||| | ||||||| || || || Sbjct 20240 TGGATGTTTAGACCGATGCCACCAGCCGTCTTGCTTATCATAGCACACGTCTTGAGAGTG 20299 Query 48531 TCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGC 48590 || ||||| || || ||| || ||| ||||| | | || || ||||||||| Sbjct 20300 TCGTAAATACCCTCAATAGAGTCTTCTTTCATAGACACCAAGAAGCACGACGACATTTGC 20359 Query 48591 GGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGAT 48650 |||||| || || | ||| || | || || |||||||| | || || || || Sbjct 20360 GGATGAGGCGTGCCAGCATTGAACAGAGTCGGCGATGCATGTGTGAATGCCTTTTCAGAC 20419 Query 48651 AACAATTTATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATAC 48709 | | || ||||| ||||| || ||||| || || | || || || | || || Sbjct 20420 ATGTAGTTGTATGTCTCAATGGCACTTTCTATGTCTTCACCG-TGAATGCCAACAGCGAC 20478 Query 48710 ACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGA 48769 |||||| | ||| | ||||| | |||| | | ||| ||| || ||| || || || Sbjct 20479 ACGCATGAGCATGTGCTGAGGCCGTTCAGCCACTTTTCCATTAATGCGCAAGAGGTAAGA 20538 Query 48770 TTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802 ||| | ||||| || ||||| | ||||| Sbjct 20539 GCGTTCTAGAGTTTTGAAGCCAAAGAAATTGTA 20571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108041153120