Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq54 174 3e-38 >seq54 Length=97197 Score = 174 bits (192), Expect = 3e-38 Identities = 559/862 (65%), Gaps = 32/862 (4%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| | |||||||||||||| || ||| ||||| ||||| || ||||| Sbjct 36134 GAAATCTGGCAAATGTACAAGAAGGCAGAAGCATCATTTTGGACGGCCGAGGAAATTGAC 36193 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTTCTC 25590 || |||||||| || ||| |||| || || | ||| |||| || ||| | Sbjct 36194 TTGTCCAAGGACCTGTACGACTGGGACAATCGGATGACGGACCCCGAGCGTCACTTTGTG 36253 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | | || | || ||||| || || || |||||||| || |||||||||||| |||| Sbjct 36254 AGCCATGTACTTGCGTTCTTCGCTGCATCAGATGGTATTGTCAACGAGAATCTGGTCGAG 36313 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| ||||| ||| | ||||| || ||||| || |||||||| Sbjct 36314 CGGTTCAGTGCCGAAGTCCAGGCCACTGAGGCACGTTGCTTCTATGGCTTCCAGATCATG 36373 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA- 25766 || ||||| | |||||||| || | |||||| || ||||||||| || Sbjct 36374 ATGGAAAACATCCACTCTGAAACCTACTC---GCTTCTTATTGACACGTACATTCGCGAG 36430 Query 25767 CGT---CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAG-CATCAAGA 25822 | | ||||| || | | || ||| || ||| || |||| | ||||| Sbjct 36431 CCTGAACGCCGCGACTTTT----TATTCAATGCTATTGAG-ACTGTGCCAGTCGTCAAGC 36485 Query 25823 GGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGC 25882 |||||| ||||| | |||||| ||| | || |||| ||||| | Sbjct 36486 AGAAGGCTGACTGGGCTCTACGCTGGATCTCTGACCACCGTGCCTCGTTCTCAGAGCGCC 36545 Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942 | || ||||||||||| || ||||||||||||||| || || || || ||||||||| Sbjct 36546 TTGTTGCCTTTGCTGCGGTCGAGGGCATCTTTTTCTCGGGCTCATTCGCTTCCATCTTCT 36605 Query 25943 GGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGG 26001 |||||||| | | | || | |||||| || |||| || ||||| |||||||| | Sbjct 36606 GGCTCAAG-AAACGTGGCCTCATGCCTGGTCTGTCGTTCTCCAATGAGCTCATTTCTCGT 36664 Query 26002 GACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAA 26061 ||||| || || || | || ||||| ||||| | | || |||||||| | || Sbjct 36665 GACGAAGGCCTTCATACCGACTTTGCATGCCTCTTGTTCA---GCCACTTG---AAGAAG 36718 Query 26062 CCTTCTCA---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAG 26118 | | |||| || || || || | || |||| |||||| || || |||||| |||| Sbjct 36719 CGTGCTCACCCCGACACTGTAAACCGCATTATCACAGAGGCCGTTGATATCGAGCAGGAC 36778 Query 26119 TTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAA 26178 || | || ||||| || || ||| ||||| Sbjct 36779 TTCTTGACAGACGCGCTCCCTGTCTCGCTCATTGGTATGAATGCTAGGCTGATGTGCCAA 36838 Query 26179 TACATTGAGTATGTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCTACAG 26237 |||||||||| ||| || || | || | |||| | ||||| | | | | ||||| Sbjct 36839 TACATTGAGTTTGTTGCGGATCGCCTTCTTGTGGC-TCTGGGTAACCCGAAGCACTACAA 36897 Query 26238 TACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTT 26297 || | ||||| |||||||||||||| ||||| ||| | |||| ||| | || ||||| Sbjct 36898 CTCGACAAACCCATTCGACTTTATGGAGAACATTTCGCTCCAAGGCAAGTCGAATTTCTT 36957 Query 26298 TGAAAAGAGGGTCGGCGACTAT 26319 ||| | || ||||||||| Sbjct 36958 TGAGCGCCGTGTGGGCGACTAT 36979 Score = 134 bits (148), Expect = 3e-26 Identities = 330/496 (67%), Gaps = 17/496 (3%) Strand=Plus/Plus Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTAT-----GATCTCTGTA 221767 ||| ||||||||||| || ||| || ||| ||||||| ||| || ||| Sbjct 19657 GGCTAGGTTACACACTGCTGTCTCCTC-----TGGCGAACTGTATTCCATGATTTCGGTA 19711 Query 221768 CAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG 221827 ||||| ||| || |||||| || || |||| || |||||| ||||| ||||| || Sbjct 19712 CAGAGATTGGAGCTCTTGATCGTGCCGAGGTTCTTCTGATTACTTTTGCGGTTGGCCGCA 19771 Query 221828 TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAG 221887 || ||||| | ||| || ||| ||| ||||| | |||||| ||||||| | ||| Sbjct 19772 TCTTTGTATAACATGAACGGATTGCCCGTCTCTATTTGAGCCTCCAGAATGGCATACCAC 19831 Query 221888 AGTTCTCTGGCGCTCACCG--TCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTAT 221945 || | ||||| || || || | ||| | |||||| || |||| | || Sbjct 19832 AGCT-TCTGGGCCTTGACGGATCGTTTTGCACG-ACCCTCACGCT---CATAACGTTCAT 19886 Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005 | ||| || |||| || ||||| || | || ||||| || ||||||| Sbjct 19887 AAAGCTCTTCGAACTCCTCGCCGTAGCAATCAGCAAGACCTGGTGCTTCAGCTGGACACA 19946 Query 222006 TCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCG 222065 | ||| ||| | || || | | || | || |||||| ||||| || | ||||| | Sbjct 19947 TAAGAGACCAATCCTCATTCTTCTCAACACGCTTCATGAAAAGGTCTGGCACCCACATGG 20006 Query 222066 CCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAA 222125 || | || | ||| | | || ||| ||| || | ||||| | ||||||| | Sbjct 20007 CCAGGAACAAATCGCGTGCGCGAACCTCGTCCTTTCCATGATTTTTACGAAGATCCACGA 20066 Query 222126 ACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGT 222185 | ||||| | |||| |||||||||||||||||| | ||| | || || ||||| |||| Sbjct 20067 ATTCAAACACATCAGGGTGCCACGGCTCCAGATAAATGGCAAACGCACCTGGTCGTTTGT 20126 Query 222186 TGCCACCCTGATCCAC 222201 |||| ||||| || || Sbjct 20127 TGCCGCCCTGGTCGAC 20142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843546059520