Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq43 109 4e-18 seq57 96.9 2e-14 >seq43 Length=268523 Score = 109 bits (120), Expect = 4e-18 Identities = 354/545 (65%), Gaps = 6/545 (1%) Strand=Plus/Minus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 ||||||||||| || || || || |||||| ||||| ||||| || | || || Sbjct 146043 GGTATTGATTTGGGTACCACCTATTCTTGTGTGGCTGTGTGGCAGAACGACCGTGTCGAG 145984 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 | |||||||| ||||| ||||| | || ||||| || || ||| | || || || || Sbjct 145983 GTCATTGCCAACGACCAGGGTAACCGCACGACACCTTCGTACGTTGCCTTCACAGACACC 145924 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATT 474514 || | ||| || || ||||| || || | || | || || ||| || ||| || Sbjct 145923 GAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTGGCTATGAACCCTCACAACACTGTT 145864 Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATG 474574 || || || || || |||| ||||| || |||| || || ||||| || || ||| Sbjct 145863 TTCGACGCCAAGCGACTGATCGGTCGCAAGTTTGCCGACACGGAGGTCCAGTCGGACATG 145804 Query 474575 CGTCATTGGCCTTTTAAGGT-GATAAATGTTGGTGGTAAACC--ATATATAGAAGCAATA 474631 || ||||| || || | | | ||| | || || || ||| || |||| Sbjct 145803 AAGCACTGGCCATTCGCTGTCGTTGACCGTTCG-GGCAAGCCTGCTATCAAGGTTGAATA 145745 Query 474632 CACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAA 474691 || | ||||| || || |||| || | || || || |||||| | || Sbjct 145744 CAAG--GGTGAGGAGAAGGTTTTCACACCCGAGGAGATCTCATCGATGGTTCTCCTTAAG 145687 Query 474692 ATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTT 474751 ||| | ||||| |||| ||||| || || | || || || | ||||| Sbjct 145686 ATGCGCGAGACCGCTGAAGCATACCTTGGCTCGGACGTCAAGGACGCTGTTGTGACTGTG 145627 Query 474752 CCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGT 474811 || || || || || || || || || || || ||||| || || || ||||| || Sbjct 145626 CCTGCCTACTTCAACGACTCGCAGCGCCAGGCCACTAAGGACGCTGGTGTCATTGCTGGC 145567 Query 474812 CTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGAT 474871 || ||||| | ||||| || || || ||||| || || || |||| || |||||||| Sbjct 145566 CTGAATGTCATGCGTATCATCAACGAGCCAACGGCTGCTGCCATTGCCTACGGTCTTGAC 145507 Query 474872 AAGAA 474876 ||||| Sbjct 145506 AAGAA 145502 >seq57 Length=38780 Score = 96.9 bits (106), Expect = 2e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || || | ||||| || || ||||| || ||| || || ||| || Sbjct 33242 CGTAGACGTAGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTGTAGTCGCTTAGTGTG 33183 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||||||||| || || || || |||||||| |||||||||||||| || || ||| Sbjct 33182 CGGCCATCTTCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGGGATGCCT 33123 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 |||||||| ||||| || ||||| || || || || | | ||| || Sbjct 33122 TCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATGGTGTCGCTACTTTCGACTTCGAGC 33063 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| || ||||| || || || ||||| || Sbjct 33062 GTGATGGTTTTTCCCGTGAGGGTTTTCACAAAAATCTG 33025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268174567355984