Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq54 233 2e-56 seq48 89.7 6e-13 >seq54 Length=97197 Score = 233 bits (258), Expect = 2e-56 Identities = 525/778 (67%), Gaps = 8/778 (1%) Strand=Plus/Minus Query 53179 GCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTG 53237 ||||||| | | ||||||| ||||| | || || |||||||| ||| || | ||| Sbjct 20500 GCCTCAGCACATGCTCATGCGTGTCGCTGTTGGCATTCACGGTGAAGACATAGAAA-GTG 20442 Query 53238 TCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGT 53297 | |||||| ||| ||| ||| ||||| || || || || |||| || |||| Sbjct 20441 CCATTGAGACATACAACTACATGTCTGAAAAGGCATTCACACATGCATCGCCGACTCTGT 20382 Query 53298 TCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATG 53357 |||| ||||| ||| ||| || || |||||| |||||| ||||| | ||||| || | Sbjct 20381 TCAATGCTGGCACGCCTCATCCGCAAATGTCGTCGTGCTTCTTGGTGTCTATGAAAGAAG 20322 Query 53358 ACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGG 53417 |||| || || || || ||||| || |||||| |||||| || |||| | | | Sbjct 20321 ACTCTATTGAGGGTATTTACGACACTCTCAAGACGTGTGCTATGATAAGCAAGACGGCTG 20262 Query 53418 GTGGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 |||| |||||| | || | || |||||| | ||| || || || |||| Sbjct 20261 GTGGCATCGGTCTAAACATCCACAATATCCGTGGTACAGGCTCATACATTGCTGGCACGA 20202 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 | || || | ||||||| ||||| ||||| || || |||||||||||||| || |||| Sbjct 20201 ATGGAGTAAGCAATGGAATTGTGCCCATGCTTCGAGTTTTCAACAACACGGCTCGTTACG 20142 Query 53538 TCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCAC 53596 || ||||||| || || || | ||| | |||| ||||| || || |||||||||||| Sbjct 20141 TCGACCAGGGCGGCAACAAACGACCAGGTG-CGTTTGCCATTTATCTGGAGCCGTGGCAC 20083 Query 53597 GCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC 53656 | || | | || || | || || ||| ||||| || | || ||| | ||| Sbjct 20082 CCTGATGTGTTTGAATTCGTGGATCTTCGTAAAAATCATGGAAAGGACGAGGTTCGCGCA 20023 Query 53657 CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716 || || |||| || ||||| | || ||||| |||||| | || |||||| | Sbjct 20022 CGCGATTTGTTCCTGGCCATGTGGGTGCCAGACCTTTTCATGAAGCGTGTTGAGAAGAAT 19963 Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776 ||||| |||| || ||||| || || || || || | | |||||| ||| Sbjct 19962 GAGGATTGGTCTCTTATGTGTCCAGCTGAAGCACCAGGTCTTGCTGATTGCTACGGCGAG 19903 Query 53777 GAGTTTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGA-AGGTCA 53834 ||||| | ||| | ||| | ||| || | | |||| || | ||| | || |||| Sbjct 19902 GAGTTCGAAGAGCTTTAT-GAACGTTATGAGCGTGAGGGTCG-TGCAAAACGATCCGTCA 19845 Query 53835 AGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACA 53894 |||| | || | ||| |||| || || || || | |||||||| | |||| || Sbjct 19844 AGGCCCAGAAGCTGTGGTATGCCATTCTGGAGGCTCAAATAGAGACGGGCAATCCGTTCA 19785 Query 53895 TGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 ||| ||||| ||| ||| |||| || || || ||||||||| ||||| ||||| Sbjct 19784 TGTTATACAAAGATGCGGCCAACCGCAAAAGTAATCAGAAGAACCTCGGCACGATCAA 19727 >seq48 Length=724325 Score = 89.7 bits (98), Expect = 6e-13 Identities = 184/270 (68%), Gaps = 8/270 (3%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGA--CGCGTACCGAATT 117362 ||||| |||||||||| || || |||||||||||||| || | || | || |||| Sbjct 84351 GTGAAGATGTAACGAGCACTGGCCGCATCCTTGCCACC--CATGCTTCGAGAGCCAAATT 84408 Query 117363 GTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGA 117422 |||| ||||| | | |||| ||||| ||| ||||| ||| || | || Sbjct 84409 GTCCGTTCGGCATGAGCAAATTCACATTGTTACTGCCGCAAAAGTCTTGCGCGAGACCGA 84468 Query 117423 CAATCGTACCTTGG--AGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTA 117480 | ||||| | ||| || | || |||||||||||||||| ||||| | ||| || Sbjct 84469 CGATCGT--CATGGTCAGAGCCTGATCGCCATGGTGATACGCCGAATGCTCGGACACATA 84526 Query 117481 GCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAAT 117540 |||| || ||| ||||| || |||| | | || || ||| | || | | || Sbjct 84527 GCCCTGGAGTTGATGGACCTTGATTTCTGTCTTGAGCTTGCGCTTAAAACAACTAAAGAT 84586 Query 117541 CACCTTGCGCTGACTTGGCTTCAGACCATC 117570 |||||| ||||| | |||||| || ||||| Sbjct 84587 CACCTTCCGCTGTCCTGGCTTGAGTCCATC 84616 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 119090 AGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCCTCGTCGTTGTAGTTG 119149 ||||| |||||| |||| ||||||||||| ||||| | ||| || |||| |||||| Sbjct 86274 AGCTTCGCACCGAATCCATTCCGACCACCTGTCACCTTCGCCTCGTCATCGTCGTAGTTT 86333 Query 119150 GAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 || ||||| || | |||||||||||||||||| || Sbjct 86334 GACGATGTCAACAGATTCCCAAAGATGAGCTCGGGTAT 86371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215261258400