Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq54 159 5e-34 >seq54 Length=97197 Score = 159 bits (176), Expect = 5e-34 Identities = 392/590 (66%), Gaps = 12/590 (2%) Strand=Plus/Minus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 |||||||| || |||||| ||||| || | | ||| | || || || || | ||| Sbjct 36693 CATGCAAAGTCGGTATGAAGGCCTTCGTCACGAGAAATGAGCTCATTGGAGAACGACAGA 36634 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 || ||||| || |||||||| |||||||| || || | ||||| || || || || || Sbjct 36633 CCAGGCATGAGGCCACGTTTCTTGAGCCAGAAGATGGAAGCGAATGAGCCCGAGAAAAAG 36574 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT--- 48317 ||||| || || || ||||| || ||| | |||| | | ||| || || Sbjct 36573 ATGCCCTCGACCGCAGCAAAGGCAACAAGGCGCTCTGAGAACGAGGCACGGTGGTCAGAG 36514 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 ||||| ||| | ||||| |||||||||| ||| || |||| || || |||||||| Sbjct 36513 ATCCAGCGTAGAGCCCAGTCAGCCTTCTGCTTGACGACTGGCACAGTCTCAATAGCATTG 36454 Query 48378 AAGAGAAAGttttt---ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATAC 48434 || | ||||| |||| ||| | || ||| || || || | ||| || Sbjct 36453 AATAAAAAGTCGCGGCGTTCAG-GCTCGCG--AATGTACGTGTCAATAAGAAGCGAGTAG 36397 Query 48435 ATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTG 48494 |||| ||||| || ||||| || ||||| || || || || || | || || ||| Sbjct 36396 GTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAGAAGCAACGTGCCTCAGTG 36337 Query 48495 ATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCA 48554 ||| || || | || || || || ||| |||||| || || || ||||| ||| Sbjct 36336 GCCTGGACTTCGGCACTGAACCGCTCGACCAGATTCTCGTTGACAATACCATCTGATGCA 36277 Query 48555 GCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTC 48611 || || || || | |||||| | | ||| | ||| | |||| | || | | Sbjct 36276 GCGAAGAACGCAAGTACATGGCTCACAAAGTGACGCTCGGGGTCCGTCATCCGATTGTCC 36217 Query 48612 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCT 48671 ||||| | | || || || | || | ||| || || |||||||||||||| ||||| Sbjct 36216 CAGTCGTACAGGTCCTTGGACAAGTCAATTTCCTCGGCCGTCCAAAATGATGCTTCTGCC 36157 Query 48672 TTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || || ||||| | ||| || ||| ||| |||| ||||| | ||||| Sbjct 36156 TTCTTGTACATTTGCCAGATTTCATGGTAACGGATCGGGAACAGGACAAA 36107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667862197120