Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264795.1_202015-08-11] 108 sequences; 8,884,250 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq38 178 3e-39 seq57 149 1e-30 seq37 149 1e-30 >seq38 Length=383934 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| |||||||| || || || || || || || |||||||||||| Sbjct 105109 ACCACCACGCAAACGAAGTACGAGGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCACT 105168 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || ||||||| || |||||||| || Sbjct 105169 CAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGG 105228 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| || ||||| || || || | || || |||||||| | ||| || Sbjct 105229 AATACCCTCCTTGTCCTGAATCTTCGCCTTGACATTCTCAATCGTGTCCGACGATTCCAC 105288 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||||| ||||| ||||| | ||||| Sbjct 105289 CTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 105336 Score = 93.3 bits (102), Expect = 9e-14 Identities = 171/248 (69%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485 || || || || ||||| || | ||| | || || ||| || ||| | ||||| || Sbjct 148341 AAGATTGATCCTTATATGAATATTGATGCAGGTACCATGGCGCCTACTGAGCATGGCGAG 148282 Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545 ||||| ||| | | ||||||| |||| ||| ||||| || || |||||||||| | | Sbjct 148281 GTGTTTGTGCTGAACGATGGTGGTGAAGTCGACCTGGACCTTGGAAACTACGAACGATAC 148222 Query 301546 ACTTCAT-TAACCCTTAAGCGTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAAAGT 301604 || || | || || | ||| || | |||| |||| || ||| | |||| |||| Sbjct 148221 -CTGAATGTGACGCTGACGCGCGATAATAATATTACCACAGGCAAGATTTACCGTGAAGT 148163 Query 301605 TATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCACAT 301664 ||||| || || || ||| ||| || || ||||||||||| |||| || ||| | Sbjct 148162 CATCGAGAAGGAGCGTCGTGGTGACTACCTGGGTAAGACGGTGCAGATTGTGCCGCACCT 148103 Query 301665 CACCGATG 301672 || |||| Sbjct 148102 GACGGATG 148095 >seq57 Length=38780 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || |||| || | ||||| |||||||| || |||||||| Sbjct 33248 CCACCGCGTAGACGTAGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTGTAGTCGCTT 33189 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || ||||| ||||| || || | |||||||| ||| ||| Sbjct 33188 AGTGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGGG 33129 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| || || || || || ||| | ||||| ||||| | ||||||| Sbjct 33128 ATGCCTTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATGGTGTCGCTACTTTCGACT 33069 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| || || ||||| | || || || || |||||||| Sbjct 33068 TCGAGCGTGATGGTTTTTCCCGTGAGGGTTTTCACAAAAATCTGCAT 33022 >seq37 Length=924257 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| ||||| || | || || || ||||||||||||||| || ||||| || Sbjct 109805 CGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCG 109746 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 || || || || || || || ||||||| ||| |||||||| ||||| ||||||||| Sbjct 109745 TCTTCAAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTG 109686 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || || ||||| || || || | || || |||||||| | || || ||||| |||||| Sbjct 109685 TCCTGAATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATC 109626 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || ||||| ||||| ||||| || ||||| Sbjct 109625 GTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 109591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737751574632