Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq113 325 4e-84 seq50 122 9e-23 seq42 122 9e-23 seq112 120 3e-22 >seq113 Length=348542 Score = 325 bits (360), Expect = 4e-84 Identities = 571/825 (69%), Gaps = 15/825 (2%) Strand=Plus/Plus Query 116603 CGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAG 116662 || ||||| | ||||| || | |||| || || |||| |||||||| ||||| || Sbjct 39325 CGCTTCGTCCTGTTCCCAATCCGTTACCATGAAATCTGGCAAATGTACAAGAAGGCAGAA 39384 Query 116663 GCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAG--- 116719 || || || ||||| | ||||| | ||| ||||||||||| | ||||||||| Sbjct 39385 GCATCATTTTGGACGGCTGAGGAAATTGACTTGTCCAAGGACCTGTACGACTGGGACAAT 39444 Query 116720 CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGC 116779 || ||| ||| ||||| || || | | || || || || || ||||| || Sbjct 39445 CGGATGACGGACCCTGAGCGTCACTTTGTGAGCCATGTACTTGCGTTCTTCGCTGCATCA 39504 Query 116780 GACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAG 116839 || || || ||||||||||||||||||||||| ||| | || || |||| | ||| Sbjct 39505 GATGGTATTGTCAACGAGAATCTGGTCGAGCGGTTCAGTGCCGAAGTCCAGGCCACTGAG 39564 Query 116840 GCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCG 116899 || || |||||||| ||||| |||||| ||||| ||| | ||||| |||| || ||| Sbjct 39565 GCACGTTGCTTCTATGGCTTCCAGATCATGATGGAAAACATCCACTCCGAAACCTACTCG 39624 Query 116900 ACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCG----TTTGTTGAACGC 116955 || || ||||||||| | ||| | || | || || |||||| || || Sbjct 39625 CTTCTTATTGACACGTACATTCGCGAGCCTGA----ACGCCGCGACTTTTTGTTCAATGC 39680 Query 116956 CATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGG 117015 |||||||| |||| |||||| ||||||| || ||||| |||||||||||| | | Sbjct 39681 TATCGAGACTGTGCCAGTCGTCAAGCAGAAGGCTGACTGGGCTCTGCGCTGGATCTCGGA 39740 Query 117016 CAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTT 117075 | ||| | ||| |||||||| || ||||| || || ||||||||| |||| || Sbjct 39741 CCACCGTGCCTCGTTCTCAGAGCGCCTTGTTGCCTTTGCTGCGGTCGAGGGCATCTTTTT 39800 Query 117076 TTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGAC 117135 |||||| ||||| |||| || |||||||||||||| ||||||||||| || ||| | Sbjct 39801 CTCGGGCTCATTCGCTTCCATCTTCTGGCTCAAGAAACGTGGCCTCATGCCTGGTCTGTC 39860 Query 117136 TTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT 117195 ||| ||| |||||||| || | ||||| || || ||| ||||||||| || | | Sbjct 39861 GTTCTCCAATGAGCTCATTTCTCGTGACGAAGGCCTTCATACCGACTTTGCATGCCTCTT 39920 Query 117196 GTTCAAGCATTTGGTGCAGCG-ACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACG 117254 ||||| || ||| | |||| | | | || | | || | || |||| || | Sbjct 39921 GTTCAGCCACTTGAAGAAGCGTGCTCACCCCGACAC-TGTAAACCGCATTATCACAGAGG 39979 Query 117255 CGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCA 117314 | || | ||||||||| |||| | || || ||||| || || || | || | | Sbjct 39980 CCGTTGATATCGAGCAGGACTTCTTGACAGACGCGCTCCCTGTCTCGCTCATTGGTATGA 40039 Query 117315 ATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTG 117373 | ||| | | ||||| |||||||| ||||| || || || | || || | | ||| Sbjct 40040 A-TGCTAGGCTGATGTGCCAATACATTGAGTTTGTTGCGGATCGCCTTCTTGTGGCTCTG 40098 Query 117374 GTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATG 117418 | | | | |||||||||||| || | ||||| | ||||||||| Sbjct 40099 GGCAACCCGAAGCACTACAACTCGACAAACCCCTTCGACTTTATG 40143 >seq50 Length=33972 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| |||||||| ||||||||||| |||| |||||| | | Sbjct 32998 ATGCAGATTTTTGTGAAAACCCTCACGGGGAAAACCATCACGCTCGAAGTCGAAAGTAGC 33057 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| ||||||| ||||| || |||||||| | || || Sbjct 33058 GACACCATCGACAACG-TCAAGGCCAAAATTCAGGACAAGGAAGGCATCCCGCCTGATCA 33116 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || || | ||| || |||||||| || || | ||||| || | |||||| || Sbjct 33117 ACAACGCCTTATTTTCGCCGGTAAACAGCTTGAAGATGGTCGCACACTAAGCGACTATAA 33176 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 || || || ||| ||| || || Sbjct 33177 TATTCAAAAAGAGAGCACTCTTCA 33200 >seq42 Length=207451 Score = 122 bits (134), Expect = 9e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || ||||| || ||||| |||| || || || | Sbjct 89243 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 89184 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | | |||| || |||| ||||| |||||||| || ||||||| Sbjct 89183 GACACGATTGACAATG-TGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCA 89125 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| ||| || || ||||| || |||| ||||| || | |||||||| Sbjct 89124 ACAGCGTCTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGAGTGACTACAA 89065 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| | || || || || ||| Sbjct 89064 CATCCAGAAGGAGTCGACCCTTCACCTGGTG 89034 >seq112 Length=388586 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || |||||||| || |||||| |||| || ||| | | Sbjct 110046 ATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCG 109987 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | |||||| || |||| ||||| ||||| || || ||||||| Sbjct 109986 GACACGATTGAGAATG-TCAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCA 109928 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| ||| || || ||||| || || | || || || | |||||||| Sbjct 109927 ACAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACTCTGAGTGACTACAA 109868 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| ||||||||| | || |||| || ||| | || ||| | || || Sbjct 109867 CATTCAGAAGGAGTCGACCTTGCACCTCGTGCTTCGTTTGCGTGGTGG 109820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218472252880