Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq112 131 2e-25 seq50 120 3e-22 seq42 111 2e-19 >seq112 Length=388586 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 ||||| | ||| | ||||| || |||||| ||||| ||||| ||| |||||| || Sbjct 109829 AAACGAAGCACGAGGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGG 109888 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 | || || ||||||||||||||||| || || ||||| ||||| | || | | |||| Sbjct 109889 CCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCC 109948 Query 43086 TTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 43144 |||||| ||| | || | |||| || | | |||||| ||||||||| |||| || Sbjct 109949 TTGTCC-TGAATCTTCGCCTTGACATTCTCAATCGTGTCCGACGATTCCACCTCGAGGGT 110007 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || |||||||| || ||||| || || | |||||| Sbjct 110008 GATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 110046 >seq50 Length=33972 Score = 120 bits (132), Expect = 3e-22 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | |||||| || | |||||||| ||||||||||| || || Sbjct 33224 CCACCGCGTAGACGTAGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTATAGTCGCTT 33165 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || ||||| ||||| ||||| || || || || || || | ||| Sbjct 33164 AGTGTGCGACCATCTTCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGGG 33105 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCC-ACCGTGTCGCTCGATTCCA 43134 | || ||||||||| ||| |||| | |||| ||| | | | |||||||| ||| | Sbjct 33104 ATGCCTTCCTTGTCC-TGAATTTTGGCCTTGA-CGTTGTCGATGGTGTCGCTACTTTCGA 33047 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||| |||||||||||| ||||| || || || ||||| || ||||| Sbjct 33046 CTTCGAGCGTGATGGTTTTCCCCGTGAGGGTTTTCACAAAAATCTGCAT 32998 >seq42 Length=207451 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||| |||||| || |||| || ||||||||||||||||| Sbjct 89052 CTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAA 89111 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||| ||||| | || | || |||||||||| ||| | || | || | Sbjct 89112 GATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTCACAT 89170 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || || || |||| |||||| || ||||| || | ||||| | Sbjct 89171 TGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAAAGTCTTGA 89230 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 89231 CGAAGATTTGCAT 89243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816792307640