Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq113 132 6e-26 >seq113 Length=348542 Score = 132 bits (146), Expect = 6e-26 Identities = 628/978 (64%), Gaps = 30/978 (3%) Strand=Plus/Plus Query 66020 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAG 66076 |||| | |||||||| | ||||| || |||| |||| || || ||||| || || Sbjct 23135 TTCAGCTGGACACATAAGAGACCAATCC---TCATTCTTCTCAACACGCTTCATGAAAAG 23191 Query 66077 ATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 66136 || || | ||| | || | || ||||| | | | | || || ||||| || Sbjct 23192 GTCTGGCACCCACATGGCCAGGAACAAATCGCGTGCGCGAACCTCGTCCTTTCC---ATG 23248 Query 66137 CTTTTTA---AGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGC 66193 |||||| ||||| | ||| | | | |||| |||||||| |||| || ||||| Sbjct 23249 GTTTTTACGAAGATCCACGAATTCAAACACATCAGGGTGCCACGGCTCCAGATAAATGGC 23308 Query 66194 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 66253 | | || || |||||||| || || || || | ||| | ||| ||||| || |||| Sbjct 23309 AAACGCACCTGGTCGTTTGTTGCCGCCTTGGTCGACGTAACGAGCCGTGTTGTTGAAAAC 23368 Query 66254 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 66313 || | ||| || | ||| |||||| | ||||| || || | || || || | Sbjct 23369 TCGAAGCATGGGCACAATTCCATTGCTTACTCCATTCGTGCCAGCAATGTATGAGCCTGT 23428 Query 66314 TGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 66373 |||| ||||| || |||||| || || || ||| | || || | || || Sbjct 23429 ACCACGGATATTGTGGATGTTTAGACCGATGCCACCAGCCGTCTTGCTTATCATAGCACA 23488 Query 66374 TCGTTTTAAC-GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 66432 ||| || | || || || || ||||| ||| || || |||| | | || | Sbjct 23489 -CGTCTTGAGAGTGTCGTAAATACCCTCGATAGAGTCTTCTTTCATAGACACCAAGAAGC 23547 Query 66433 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 66492 | |||||||| || | || || |||||||| | || || || || || || | Sbjct 23548 ACGACGACATTTGCGGATTAGGTGTGCCAGCATTAAACAGAGTCGGCGATGCATGTGTGA 23607 Query 66493 ACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATG 66550 | |||||||| | |||| ||||| |||||||| || ||||| || || | || Sbjct 23608 ATGCCTTTTCAGACATGTAG-TTGTATGTCTCAATGGCACTTTCTATGTCTTCACCG-TG 23665 Query 66551 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 66610 ||| || || ||||||||||| | |||||||||||| | |||| | | || || || Sbjct 23666 AATGCCAACAGCGACACGCATGAGCATGTGCTGAGGCCGTTCAGCAACTTTTCCATTAAT 23725 Query 66611 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 66670 ||| | ||| || ||| | |||||| || ||||| ||||||| ||||| || Sbjct 23726 GCGCAAGAGGTAAGAGCGTTCTAGAGTTTTGAAGCCAAAGAAGTTGTAGTGGAAGTCACG 23785 Query 66671 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT 66730 || || || ||| | |||| || || || ||| | || || | || Sbjct 23786 CTCATAGATGATAGCGGAGTCCAGAAGTTCGCGATGTTTCATCACAGTATTGAAAGT--C 23843 Query 66731 ACTT--GAAATAATCGGAG-AATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATC 66787 ||| || || || |||| | ||| | || ||||| ||||||| ||||| Sbjct 23844 TCTTCGGATATCAT-GGAGCTCGGGCGGCCAGTCTTTGGATTCACATAGTCATGCAAATC 23902 Query 66788 CTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TGATACGGCTATT 66845 || || |||| ||||| ||| || || || ||||| ||||| |||| ||| || Sbjct 23903 CTGAATGACTTGGCTAAAACTTTTCTTGGTCTCCTTGTGAAGATTGCTGAT--GGCAATC 23960 Query 66846 CTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGC 66904 | || || | | ||||||||| || ||| || || | || || || ||||||| Sbjct 23961 CGCGCTGCCAGTACGGCATAATCTGGGTGTGTCGTGGT-CTTGTACGCGGCCGTTTCGGC 24019 Query 66905 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||||| | | || | || || || || || || | || || || | ||||||||| | Sbjct 24020 TGCCAAATTATCGAGCTCAACGGTCGTGACCCCCTCGTAGATACCATCGATAACCTTTCT 24079 Query 66965 AGCTATTTTAATAGGATC 66982 | |||| || ||||| Sbjct 24080 CGTAATTTCGATGGGATC 24097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171870330920