Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq50 96.9 3e-15 seq113 91.5 1e-13 >seq50 Length=33972 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/145 (75%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||| ||| | || ||||||| || |||||||||||| ||||| ||||| Sbjct 33225 GCCACCGCGTAGACGTAGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTATAGTCGCT 33166 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||||| ||||| ||||||||||| || | || || ||||| ||||| || || Sbjct 33165 TAGTGTGCGACCATCTTCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGG 33106 Query 139657 TATGCCTTCTTTGTCGGTGATTTTT 139681 |||||||| ||||| ||| |||| Sbjct 33105 GATGCCTTCCTTGTC-CTGAATTTT 33082 >seq113 Length=348542 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 52836 AGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGG 52895 ||||||||| || || || | || || || || ||||| | || || || | | || Sbjct 39975 AGAGGCCGTTGATATCGAGCAGGACTTCTTGACAGACGCGCTCCCTGTCTCGCTCATTGG 40034 Query 52896 CATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCA 52955 ||||| || | |||||||| | ||||| |||||||||||||| | || | || Sbjct 40035 TATGAATGCTAGGCTGATGTGCCAATACATTGAGTTTGTTGCGGATCGCCTTCTTGTGGC 40094 Query 52956 GCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATC 53015 || || | ||||| |||| || || |||||||| |||||| | ||||| || Sbjct 40095 TCTGGGCAACCCGAAGCACTACAACTCGACAAACCCCTTCGACTTTATGGAGAACATTTC 40154 Query 53016 GCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTA 53060 |||| | ||||| | || || || ||| | || |||||||| || Sbjct 40155 GCTCCAAGGCAAGTCGAATTTCTTTGAGCGGCGAGTGGGCGACTA 40199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063299309600