Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq50 138 3e-27 seq42 114 3e-20 seq112 105 2e-17 >seq50 Length=33972 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 ||||| |||||||||||||| ||| || | ||| ||||| || ||||| || || ||| Sbjct 33188 TCTTTTTGAATATTATAGTCGCTTAGTGTGCGACCATCTTCAAGCTGTTTACCGGCGAAA 33129 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||||||||||| || || ||||| || |||||||| || || || || || Sbjct 33128 ATAAGGCGTTGTTGATCAGGCGGGATGCCTTCCTTGTCCTGAATTTTGGCCTTGACGTTG 33069 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| |||||| ||| || || || || || || || || || || ||||| ||| Sbjct 33068 TCGATGGTGTCGCTACTTTCGACTTCGAGCGTGATGGTTTTCCCCGTGAGGGTTTTCACA 33009 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 33008 AAAATCTGCAT 32998 >seq42 Length=207451 Score = 114 bits (126), Expect = 3e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 104344 CCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACC 104403 || ||| || || || | || || || ||||| || || |||||| ||||| | ||| Sbjct 89028 CCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACC 89087 Query 104404 GTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTT 104463 |||||| || || || ||||| || || || | |||||| || ||||| || || || || Sbjct 89088 GTCTTCAAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTT 89147 Query 104464 ATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAA 104522 ||||||||||| || || ||||| || | || || | ||| || ||||| || || | Sbjct 89148 GTCCTGAATCTTGGCCTTCACATTGTCAATCGTGTC-CGAGGACTCAACCTCGAGCGTGA 89206 Query 104523 TAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||| ||||| | || || || || || ||||| Sbjct 89207 TCGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 89243 >seq112 Length=388586 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || || || || || |||||||| || |||||| ||||| | || || Sbjct 109834 AAGCACGAGGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATC 109893 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || ||||| || || || | |||||| || ||||| || || || || || Sbjct 109894 CTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTC 109953 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || ||||| || | || || | ||| ||||| || || || || Sbjct 109954 CTGAATCTTCGCCTTGACATTCTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGT 110013 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || || || || || | ||||| Sbjct 110014 CTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 110046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396732991004