Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq50 141 6e-29 seq56 104 2e-17 >seq50 Length=33972 Score = 141 bits (156), Expect = 6e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | |||||| |||||||||||||| ||||||||||| || || Sbjct 33224 CCACCGCGTAGACGTAGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTATAGTCGCTT 33165 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | ||||| ||||| || || |||||||||||||| | ||| Sbjct 33164 AGTGTGCGACCATCTTCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGGG 33105 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| |||||| ||| || || | || || || | |||||| ||| Sbjct 33104 ATGCCTTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATGGTGTCGCTACTTTCGACT 33045 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | || || ||||| ||||| | ||||||||| || ||||||||| Sbjct 33044 TCGAGCGTGATGGTTTTCCCCGTGAGGGTTTTCACAAAAATCTGCATG 32997 >seq56 Length=6950 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 1885 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 1944 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 1945 GCCAATATTTAGCTTTA 1961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946738714903