Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq50 120 3e-22 seq42 107 2e-18 seq112 89.7 4e-13 >seq50 Length=33972 Score = 120 bits (132), Expect = 3e-22 Identities = 169/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGA--GTCGT 25056 ||||| || ||||| || || | || || ||| ||||||| ||||||| || || | Sbjct 32998 ATGCAGATTTTTGTGAAAACCCTCACGGGGAAAACCATCACGCTCGAAGTCGAAAGTAGC 33057 Query 25057 CTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 ||||| ||||| |||| | || |||| ||| ||||| ||||| || || ||| Sbjct 33058 --GACACCATCGACAACGTCA---AGGCCAAAATTCAG-GACAAGGAAGGCATCCCGCCT 33111 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 || ||||| || ||||||| ||||| ||||| | ||||||| |||||| | |||| Sbjct 33112 GATCAACAACGCCTTATTTTCGCCGGTAAACAGCTTGAAGATGGTCGCACACTAAGCGAC 33171 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||||||||| ||| || || || |||||| | ||| | || || Sbjct 33172 TATAATATTCAAAAAGAGAGCACTCTTCACTTGGTGCTACGTCTACGCGGTGG 33224 >seq42 Length=207451 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| || || | ||||| |||| || ||||| || Sbjct 89243 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 89184 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || ||||| | || | ||| ||||| || || ||||| || ||||| Sbjct 89183 GACACGATTGACAATGTGAAGGCCAAGATTCAG-GACAAGGAGGGCATTCCTCCGGACCA 89125 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || || || || | ||||| | ||||||| || | || ||||| Sbjct 89124 ACAGCGTCTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGAGTGACTACAA 89065 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 89064 CATCCAGAAGGAGTCGACCCTTCACCTGGTGCT 89032 >seq112 Length=388586 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| |||| || || | ||||| |||| ||||| ||||| Sbjct 110046 ATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCG 109987 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 109986 GACACGATTGAGAATGTCAAGGCGAAGATTCAG-GACAAGGAGGGTATTCCTCCGGACCA 109928 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || || || || | || |||| || ||| || | || ||||| Sbjct 109927 ACAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACTCTGAGTGACTACAA 109868 Query 25178 TATTCAAAAAGAATCCAC 25195 ||||| || || || || Sbjct 109867 CATTCAGAAGGAGTCGAC 109850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327403226095