Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq50 123 2e-23 seq112 96.9 3e-15 seq113 95.1 1e-14 seq42 87.8 2e-12 >seq50 Length=33972 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| | || || ||||| |||| || ||||| |||| | | Sbjct 32998 ATGCAGATTTTTGTGAAAACCCTCACGGGGAAAACCATCACGCTCGAAGTCGAAAGTAGC 33057 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| |||||||| |||||||| || || || || |||||| Sbjct 33058 GACACCATCGACAACGTCAAGGCCAAAATTCAGGACAAGGAAGGCATCCCGCCTGATCAA 33117 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| ||||| || ||||| |||||| | || ||| ||||| | ||| || || Sbjct 33118 CAACGCCTTATTTTCGCCGGTAAACAGCTTGAAGATGGTCGCACACTAAGCGACTATAAT 33177 Query 22399 ATTCAAAAAGA 22409 ||||||||||| Sbjct 33178 ATTCAAAAAGA 33188 >seq112 Length=388586 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | || || || ||| |||| || || |||||| | | Sbjct 110046 ATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCG 109987 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || ||||| ||||||||||||||||| || || ||| Sbjct 109986 GACACGATTGAGAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAA 109927 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | |||||| ||| || | || |||||| Sbjct 109926 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACTCTGAGTGACTACAAC 109867 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || ||| | || | || | || ||||| || ||| Sbjct 109866 ATTCAGAAGGAGTCGACCTTGCACCTCGTGCTTCGTTTGCGTGGTGGT 109819 >seq113 Length=348542 Score = 95.1 bits (104), Expect = 1e-14 Identities = 282/432 (65%), Gaps = 21/432 (5%) Strand=Plus/Plus Query 117081 GTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTATCAAGACCAAAGGT 117140 ||||| ||||| || || || ||| || ||| |||| || | |||||| || Sbjct 39784 GTCGAGGGCATCTTTTTCTCGGGCTCATTCGCTTCCATCTTCTGGCTCAAGAAACGTGGC 39843 Query 117141 CTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACGAAGGTTTACACACC 117200 || ||||| ||||| |||| ||| || | || || ||||||||||| | || ||| Sbjct 39844 CTCATGCCTGGTCTGTCGTTCTCCAATGAGCTCATTTCTCGTGACGAAGGCCTTCATACC 39903 Query 117201 GATTTTGCGTGCATGTACTACAACAATTATATTCCGATCAACGAAAAGTTGTCGCCACAA 117260 || ||||| ||| | | | || | | | | || ||| || || || | | Sbjct 39904 GACTTTGCATGCCTCTTGTTCAGCCACT---------TGAA-GAAGCGTGCTCACCCCGA 39953 Query 117261 CAAATATTGTCAA-----TGTTCATAGAGGCGGTGGACATTGAAAAGGAATTTTTTACAA 117315 || ||| || | ||| |||||| || || || || |||| || || ||| Sbjct 39954 CAC----TGTAAACCGCATTATCACAGAGGCCGTTGATATCGAGCAGGACTTCTTGACAG 40009 Query 117316 CAGCTCTACCCTGT-TATTTGCTGGGAATAAATGCCACGGAAATGTGTAAATACATTGAA 117374 || || |||||| | | | || || ||||| | | ||||| |||||||||| Sbjct 40010 ACGCGCT-CCCTGTCTCGCTCATTGGTATGAATGCTAGGCTGATGTGCCAATACATTGAG 40068 Query 117375 TTTGTCGCGGACAGGTTATTAGTGGAATTGCGACAACCGAAACATTTTAATACGCCGAAT 117434 ||||| ||||| | | | |||| || | | ||||| || | || || | || Sbjct 40069 TTTGTTGCGGATCGCCTTCTTGTGGCTCTGGGCAACCCGAAGCACTACAACTCGACAAAC 40128 Query 117435 CCGTTCAATTTTATGACAAACATTTCGCTGGAAGGCAAGACAAAtttttttGAGCGTCGC 117494 || ||| | |||||| ||||||||||| |||||||| | ||||| |||||||| || Sbjct 40129 CCCTTCGACTTTATGGAGAACATTTCGCTCCAAGGCAAGTCGAATTTCTTTGAGCGGCGA 40188 Query 117495 GTAGGCGAATAT 117506 || ||||| ||| Sbjct 40189 GTGGGCGACTAT 40200 >seq42 Length=207451 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || || || ||| |||| || || || || || | Sbjct 89243 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 89184 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| ||||||||||| ||||| || || ||| Sbjct 89183 GACACGATTGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 89124 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | || || ||||| | || |||||| Sbjct 89123 CAGCGTCTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGAGTGACTACAAC 89064 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 89063 ATCCAGAAGGAGTCGACC 89046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727421955845