Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq113 118 2e-21 seq36 91.5 3e-13 >seq113 Length=348542 Score = 118 bits (130), Expect = 2e-21 Identities = 299/445 (67%), Gaps = 10/445 (2%) Strand=Plus/Minus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 || || || || |||||||| |||||||| | || || || |||||| ||||||||| Sbjct 40190 ACTCGCCGCTCAAAGAAATTCGACTTGCCTTGGAGCGAAATGTTCTCCATAAAGTCGAAG 40131 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 |||||||| | ||||| ||||| || | ||| || || || | | ||| || || ||| Sbjct 40130 GGGTTTGTCGAGTTGTAGTGCTTCGGGTTGCCCAGAGCCACAAGAAGGCGATCCGCAACA 40071 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | || || | |||||| || ||||| ||||| | ||| | ||| | || Sbjct 40070 AACTCAATGTATTGGCACATCAGCCTAGCATTCATACCAATGA-GCGAGACAGGGAGCGC 40012 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 || | ||| |||| ||| | |||| ||||| | || ||| | | ||| Sbjct 40011 GTCTGTCAAGAAGTCCTGCTCGATATCAACGGCCTCTGTGATAA-TGCGGTTTACAGTGT 39953 Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGG--TGCAG 251849 | | | ||| | |||| || | | ||| ||| |||| || || || || Sbjct 39952 CGGGGTGAGCACGCTTCTTCAAGTGGCTGAACAAGAGGCATGCAAA--GTCGGTATGAAG 39895 Query 251850 ACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTT 251909 || ||||| ||| |||| ||| ||||| | ||| |||||||| | ||||| || Sbjct 39894 GCCTTCGTCACGAGAAATGAGCTCATTGGAGAACGACAGACCAGGCATGAGGCCACGTTT 39835 Query 251910 CCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACA-CCC 251968 | ||||||||||||| | || || || ||||| | | |||||||| | || | Sbjct 39834 CTTGAGCCAGAAGATGGAAGCGAATGAGCCCGAGAAAAAGATGCCCTCGAC-CGCAGCAA 39776 Query 251969 ATGCAACAAGGCGCTCAGCAAACGA 251993 | |||||||||||||| | ||||| Sbjct 39775 AGGCAACAAGGCGCTCTGAGAACGA 39751 Score = 91.5 bits (100), Expect = 3e-13 Identities = 166/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 293128 ACAAAGGCACCACGATCAGCAGCGAGGTC---AATCACTGTCTTCATAGAGATCTCCCAC 293184 |||||||| |||||||||||||| | || ||||||| ||| || || |||||| Sbjct 22086 ACAAAGGCGCCACGATCAGCAGCCATATCAATAATCACTTTCTGGCTA---ATTTCCCAC 22142 Query 293185 GATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGACCCT 293244 |||||||||| ||||||| | |||||||| | |||||||| ||||| Sbjct 22143 ACAGTCTTGTACAGGGCCTTGATGTGGTCGGGAATGCCAGGTATATTCTGGATCGACCCG 22202 Query 293245 CCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACGAGCAATGAGCTCG 293304 || | ||||| || | | |||||| | || |||| ||| | | | |||||| Sbjct 22203 CCATGTGCAATGATTTTCTGCTTCATCGAATCATTCCAAAGACCAAGTTCCACGAGCTCC 22262 Query 293305 CGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAATG 293364 || | || | | |||||| || ||||||| |||||||| || || |||||||| Sbjct 22263 CGCAAGAGCCACGGGTTGACGACTTGGAACTCGCCAGCGAGGACACGTCGCATGTAAATG 22322 Query 293365 TT 293366 || Sbjct 22323 TT 22324 >seq36 Length=1575439 Score = 91.5 bits (100), Expect = 3e-13 Identities = 399/624 (64%), Gaps = 8/624 (1%) Strand=Plus/Minus Query 218486 TGGACCAGTCGAAG-ACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTT 218544 ||||||| ||||| | ||||| || || | ||||| || |||||||| | || | Sbjct 862415 TGGACCA-TCGAATCAGAAACATACCGATCTCGGACTTTATTAACAAGGAGTTGATCTTA 862357 Query 218545 TTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCG 218604 |||||| | || || || || ||||| || || ||||| ||||||||| Sbjct 862356 TTCTCGATGGCAGACAATATCCGCTCCATCCCCAGTGTTGTCGATGGACTCAAGCCAGGA 862297 Query 218605 CAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCT 218664 ||||| ||| | |||| || ||||| || || |||||| |||||| | Sbjct 862296 CAGCGGAAGGTGATCTTCAGTTGTTTTAAGCGCAAGCTCAAGACAGAAATCAAGGTCCAT 862237 Query 218665 CAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAG 218724 || | || ||||| ||||| ||| | || || || || || ||| |||| | Sbjct 862236 CAACTCCAGGGCTATGTGTCCGAGCATTCGGCGTATCACCATGGCGATCAGGCTCTG-AC 862178 Query 218725 GGTGCC-ATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCT 218783 || | || || || | || || |||| | ||||||||||| |||| ||||| | Sbjct 862177 CATGACGATCGTCGGTCTCGCGCAAGACTTTTGCGGCAGTAACAATGTGAATTTGCTCAT 862118 Query 218784 CCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTA 218843 || ||||| || ||||| ||||| ||||||| |||||| || ||| | || Sbjct 862117 GCCGAACGGACAATTTGGCTCTCGAAGCATGGGTGGCAAGGATGCGGCCAGTGCTCGTTA 862058 Query 218844 TATCTTTACAAAGTTGTCGCCCG--TGACGCGCCAGGTGTTCAATCAGGCCGATGATGTG 218901 ||||| || | ||| | || | ||||| | ||||| | || |||||| Sbjct 862057 CATCTT--CACTGCTGTGCCACGGATCACGCGTCTCATGTTCCACGCGGACGATGAACCA 862000 Query 218902 CTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCT 218961 || || || ||||| ||||| || || |||||||| || ||||||| |||| Sbjct 861999 CTGCTAAACTATCTCGAGGATGACGGACAGAGTATTGAGCCAGAATGGTATGCACCTGTA 861940 Query 218962 ATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATT 219021 | || |||| | ||||| || | |||||||| || || | || || | Sbjct 861939 GTACCACAGGTGCTGCTGAATGGGGCGGAGGGTATCGGTACGGGATGGAGCACGTTTGTG 861880 Query 219022 CCTTCTTACAATCCCAAGGACATCATTGACAACGTCAAGCGTCTCATATCTGGCAAGGAG 219081 || |||||||||| ||| | | |||||| | |||| ||| | ||| | ||| Sbjct 861879 CCCAATTACAATCCCCGGGAAGTTGTCGACAACTTGCGTCGTCGCATGGCCGGCGAAGAG 861820 Query 219082 ATGGTACCGATGTCTCCGTGGTAC 219105 || |||||| || |||||| Sbjct 861819 TATGTGCCGATGAACCCATGGTAC 861796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835311885033