Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq50 179 7e-40 seq112 134 3e-26 seq42 125 1e-23 seq36 89.7 9e-13 >seq50 Length=33972 Score = 179 bits (198), Expect = 7e-40 Identities = 178/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | |||||||| || ||| ||||||||| || ||||| ||| Sbjct 33224 CCACCGCGTAGACGTAGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTATAGTCGCTT 33165 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | ||| || |||||||| || || | |||||| || || || Sbjct 33164 AGTGTGCGACCATCTTCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGGG 33105 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATT-CTAC 68413 |||||||||||||| ||||| || ||||||||| ||||||||||| ||| || | || Sbjct 33104 ATGCCTTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATGGTGTC-GCTACTTTCGAC 33046 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| | ||||||||||| ||||||||||| || || || |||||||| Sbjct 33045 TTCGAGCGTGATGGTTTTCCCCGTGAGGGTTTTCACAAAAATCTGCAT 32998 >seq112 Length=388586 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || ||||| || || ||||| || || || || | ||||| || | |||||| || Sbjct 109850 GTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCGAGCTGCTTACCA 109909 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| || || | |||||||| || ||||| || |||||||| |||||||| |||||| Sbjct 109910 GCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTCGCCTTG 109969 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || ||| || ||||| | ||||| || || | |||||| || || ||||| |||||| Sbjct 109970 ACATTCTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTCTTGCCCGTCAGGGTC 110029 Query 68445 TTGACGAATATCTGCAT 68461 |||||||| | ||||| Sbjct 110030 TTGACGAACACTTGCAT 110046 >seq42 Length=207451 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || ||||| || |||||||| || || || || | || ||||| Sbjct 89035 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCGTCTTCA 89094 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || ||||| || || | |||||||| || |||||||| |||||||| ||| Sbjct 89095 AGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 89154 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| || || || ||||| | || || || || | ||||| || || Sbjct 89155 ATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTG 89214 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||||||||||| || ||||| Sbjct 89215 CCAGTCAAAGTCTTGACGAAGATTTGCAT 89243 >seq36 Length=1575439 Score = 89.7 bits (98), Expect = 9e-13 Identities = 125/175 (71%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 225458 GAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGC 225517 || ||||| ||||||||||| |||| | | ||| | ||| |||| | ||| | Sbjct 1008069 GAATCGTGAGACACAATGATCGACGTAGCACTTGTCTG---CTTCAGGTAGTTTGTGATC 1008125 Query 225518 CATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCA 225577 || |||||||| | || |||| |||||| || || || |||| | |||||||||||| Sbjct 1008126 CACGCCACGTTAATTACATCCAAGTGGTTCGTCGGCTCATCCAACAACAGGATGTCAGCC 1008185 Query 225578 TCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGG 225632 | | || | ||| |||| || | |||||||| ||||| || || ||||||| Sbjct 1008186 TTGAACAGCACGGCACGCGCAAGGGCGAGCTTCATCTTCCAACCACCCGACAGGG 1008240 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 224498 AGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGG 224557 ||||| | |||||||| ||||| | ||||||||||||||||||||| | || | ||| Sbjct 1007091 AGCGCAGCGAGCGACTCACGGTCCAAGAAGTTCGTCGGCTCATCCAGCACAATGATGTGC 1007150 Query 224558 GGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCG 224617 || |||| ||| ||||| | ||| | ||| ||||||||||| || || ||||| Sbjct 1007151 GGCATACGCCAGGTGGCAGCACCCAGCACAACCTTGACCTTCTGACCACCCGAAAGGCCA 1007210 Query 224618 CGGAT 224622 || || Sbjct 1007211 CGCAT 1007215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621098208360