Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq113 277 2e-69 seq50 116 4e-21 seq42 116 4e-21 seq112 107 2e-18 >seq113 Length=348542 Score = 277 bits (306), Expect = 2e-69 Identities = 571/839 (68%), Gaps = 13/839 (2%) Strand=Plus/Minus Query 132609 ATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCAT 132668 ||| |||||||| |||||| ||||| | || || | | |||||| | ||| Sbjct 40200 ATAGTCGCCCACTCGCCGCTCAAAGAAATTCGACTTGCCTTGGAGCGAAATGTTCTCCAT 40141 Query 132669 AAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCT 132728 ||| || |||||||| | | |||||||||||| | | | ||| | || || || | Sbjct 40140 AAAGTCGAAGGGGTTTGTCGAGTTGTAGTGCTTCGGGTTGCCCAGAGCCACAAGAAGGCG 40081 Query 132729 GTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCA 132787 || || || ||||| |||||||| |||| | | ||| || | || | || | Sbjct 40080 ATCCGCAACAAACTCAATGTATTGGCACATCAGCCTAGCA-TTCATACCAATGAGCGAGA 40022 Query 132788 CCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCC 132847 | || ||||| || || | ||| |||||||| | || || || |||| || Sbjct 40021 CAGGGAGCGCGTCTGTCAAGAAGTCCTGCTCGATATCAACGGCCTCTGTGATAATGCGGT 39962 Query 132848 TAACGCGCGCCGCGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCG 132906 | || | | || | | || || | | ||| || |||||| | ||| ||||||||| Sbjct 39961 TTACA-GTGTCGGGGTGAGCACGCTTCTTCAAGTGGCTGAACAAGAGGCATGCAAAGTCG 39903 Query 132907 CAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGG 132966 ||| | ||| ||||| | |||||||| || ||| ||| | || || ||||||||| Sbjct 39902 GTATGAAGGCCTTCGTCACGAGAAATGAGCTCATTGGAGAACGACAGACCAGGCATGAGG 39843 Query 132967 CCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACG 133026 || ||||| |||||||| || |||| ||||| |||||| || |||| ||||||||| Sbjct 39842 CCACGTTTCTTGAGCCAGAAGATGGAAGCGAATGAGCCCGAGAAAAAGATGCCCTCGACC 39783 Query 133027 GCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGC 133086 || || || || || |||||||| ||||| ||| | | | |||||||||||| Sbjct 39782 GCAGCAAAGGCAACAAGGCGCTCTGAGAACGAGGCACGGTGGTCCGAGATCCAGCGCAGA 39723 Query 133087 GCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGT 133146 ||||| || ||||| | |||||| |||| || ||||| || || |||||| ||| Sbjct 39722 GCCCAGTCAGCCTTCTGCTTGACGACTGGCACAGTCTCGATAGCATTGAACAAA--AAGT 39665 Query 133147 TTC-TCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGT 133203 | | | | ||| ||| | ||| ||||| || || ||| || |||| ||||| Sbjct 39664 CGCGGCGTTC-AGGCTCGCGAATGTACGTGTCAATAAGAAGCGAGTAGGTTTCGGAGTGG 39606 Query 133204 ACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCT 133263 | ||| ||||| ||| || ||||| || ||||| || ||||| |||| ||||| Sbjct 39605 ATGTTTTCCATCATGATCTGGAAGCCATAGAAGCAACGTGCCTCAGTGGCCTGGACTTCG 39546 Query 133264 TGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCC 133323 | ||| |||||||||||||| |||||||| || || || || ||||| || || Sbjct 39545 GCACTGAACCGCTCGACCAGATTCTCGTTGACAATACCATCTGATGCAGCGAAGAACGCA 39486 Query 133324 AGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTG 133380 || || || | | || || ||||| ||| ||| || ||||||||| | | Sbjct 39485 AGTACATGGCTCACAAAGTGACGCTCAGGGTCCGTCATCCGATTGTCCCAGTCGTACAGG 39426 Query 133381 TCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||||||||| ||| | ||||| | |||||||| || || || || || |||||||| Sbjct 39425 TCCTTGGACAAGTCAATTTCCTCAGCCGTCCAAAATGATGCTTCTGCCTTCTTGTACAT 39367 >seq50 Length=33972 Score = 116 bits (128), Expect = 4e-21 Identities = 162/219 (74%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| |||||||| ||||||||||| |||| ||||| | | Sbjct 32998 ATGCAGATTTTTGTGAAAACCCTCACGGGGAAAACCATCACGCTCGAAGTCGAAAGTAGC 33057 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | | |||| | || | ||||| | ||||| || || | ||||||| || | Sbjct 33058 GACACCATCGACAACG-TCAAGGCCAAAATTCAGGACAAGGAAGGCA-TCCCGCCTGATC 33115 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || || |||| ||| || |||||||| || || | ||||| || | |||||| | Sbjct 33116 AACAACGCCTTATTTTCGCCGGTAAACAGCTTGAAGATGGTCGCACACTAAGCGACTATA 33175 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 | || ||||| || ||| || || || |||||||| ||| Sbjct 33176 ATATTCAAAAAGAGAGC-ACTCTTCACTTGGTGCTACGT 33213 >seq42 Length=207451 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || ||||| || ||||| |||| || ||| || | Sbjct 89243 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 89184 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | || || | ||||| ||||| ||||| | ||||| Sbjct 89183 GACACGATTGACAATG-TGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCA 89125 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| || || ||||| || |||| ||||| || | |||||||| Sbjct 89124 ACAGCGTCTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGAGTGACTACAA 89065 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| || || ||||||| || Sbjct 89064 CATCCAGAAGGAGTCGACCCTTCACCTGGTGCTTCG 89029 >seq112 Length=388586 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || || |||||||| || |||||| |||| || || | | Sbjct 110046 ATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCG 109987 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | || || | ||||| ||||| ||||| | ||||| Sbjct 109986 GACACGATTGAGAATG-TCAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCA 109928 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| || || ||||| || || | || || || | |||||||| Sbjct 109927 ACAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACTCTGAGTGACTACAA 109868 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| |||| |||| | ||||| |||||| | || || Sbjct 109867 CATTCAGAAGGAGTCGACCTTGCACCTCGTGCTTCGTTTGCGTGGTGG 109820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172093505920