Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq112 174 3e-38 seq50 156 9e-33 seq42 156 9e-33 seq113 89.7 1e-12 >seq112 Length=388586 Score = 174 bits (192), Expect = 3e-38 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| | || ||||| || ||||| ||||| || ||||| | ||||| ||| Sbjct 109838 ACGAGGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCG 109897 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || |||||||| |||||||| || || ||||| ||| Sbjct 109898 AGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGA 109957 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| |||||||| |||||||| |||||| || ||||| | |||||| Sbjct 109958 ATCTTCGCCTTGACATTCTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTCTTG 110017 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || |||||||||||||| Sbjct 110018 CCCGTCAGGGTCTTGACGAACACTTGCAT 110046 >seq50 Length=33972 Score = 156 bits (172), Expect = 9e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||||||| ||||||||||||||| || ||| || || | |||||||| ||||| Sbjct 33201 GTGAAGAGTGCTCTCTTTTTGAATATTATAGTCGCTTAGTGTGCGACCATCTTCAAGCTG 33142 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||| ||||| ||||| |||||||| || || || |||||||| ||||| |||||||| Sbjct 33141 TTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGGGATGCCTTCCTTGTCCTGAATTTT 33082 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || |||||||| |||||| ||||| || || | || || || || Sbjct 33081 GGCCTTGACGTTGTCGATGGTGTCGCTACTTTCGACTTCGAGCGTGATGGTTTTCCCCGT 33022 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | ||||| Sbjct 33021 GAGGGTTTTCACAAAAATCTGCAT 32998 >seq42 Length=207451 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||| || ||||| | || ||||| Sbjct 89035 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCGTCTTCA 89094 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || |||||||| ||||||||||| || ||||| ||| Sbjct 89095 AGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 89154 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || ||||| |||||||| || || || || || | |||||| Sbjct 89155 ATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTG 89214 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||||||| || ||||| | |||||| Sbjct 89215 CCAGTCAAAGTCTTGACGAAGATTTGCAT 89243 >seq113 Length=348542 Score = 89.7 bits (98), Expect = 1e-12 Identities = 173/253 (68%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 160610 GATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAA 160669 || |||||||||||| | || | | |||| ||||||| ||| | ||||| |||| Sbjct 23194 GACCTTTTCATGAAGCGTGTTGAGAAGAATGAGGATTGGTCTCTTATGTGTCCAGCTGAA 23135 Query 160670 GCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAA 160729 || || || |||| |||| || || |||||||| ||||||||| | || || Sbjct 23134 GCACCAGGTCTTGCTGATTGCTACGGCGAGGAGTTCGAAGAGCTTTATGAACGTTATGAG 23075 Query 160730 AAAGAGGGAAGAGCCAAAAAGGT-CGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGT 160788 ||||| | | ||||| | | ||| |||||||| | |||||| || ||| || | Sbjct 23074 CGTGAGGGTCGTG-CAAAACGATCCGTCAAGGCCCAGAAGCTGTGGTATGCCATTCTGGA 23016 Query 160789 CGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAGGATGCCATCTGTCGCAAGAG 160848 || ||| | ||| ||| | || || || |||||| ||||| | ||||| || Sbjct 23015 GGCTCAAATAGAGACGGGCAATCCGTTCATGTTATACAAAGATGCGGCCAACCGCAAAAG 22956 Query 160849 TAACCAGAAGAAC 160861 ||| ||||||||| Sbjct 22955 TAATCAGAAGAAC 22943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479993678671