Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq113 116 4e-21 >seq113 Length=348542 Score = 116 bits (128), Expect = 4e-21 Identities = 407/633 (64%), Gaps = 2/633 (0%) Strand=Plus/Plus Query 48171 GGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATC 48230 |||||||| | ||||||||||||| || | || | |||| || | ||||| | | Sbjct 23142 GGACACATAAGAGACCAATCCTCATTCTTCTCAACACGCTTCATGAAAAGGTCTGGCACC 23201 Query 48231 CAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGT 48290 || | || | || ||||| | | | | || || || ||| || | ||| Sbjct 23202 CACATGGCCAGGAACAAATCGCGTGCGCGAACCTCGTCCTTTCCATGGTTTTTACGAAGA 23261 Query 48291 TCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGT 48350 || | || || | | ||||| ||||| || || | ||| || || | |||||||| Sbjct 23262 TCCACGAATTCAAACACATCAGGGTGCCACGGCTCCAGATAAATGGCAAACGCACCTGGT 23321 Query 48351 CGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGG 48410 ||||| || || ||||| || | || | || || ||||| |||||| | ||| || Sbjct 23322 CGTTTGTTGCCGCCTTGGTCGACGTAACGAGCCGTGTTGTTGAAAACTCGAAGCATGGGC 23381 Query 48411 ACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA 48470 ||||| ||||| || ||||| || || | ||| || || || | | ||||| Sbjct 23382 ACAATTCCATTGCTTACTCCATTCGTGCCAGCAATGTATGAGCCTGTACCACGGATATTG 23441 Query 48471 CTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTA 48530 || | ||| || ||||| ||| | || ||| | ||||||| || || || Sbjct 23442 TGGATGTTTAGACCGATGCCACCAGCCGTCTTGCTTATCATAGCACACGTCTTGAGAGTG 23501 Query 48531 TCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGC 48590 || ||||| || || ||| || ||| ||||| | | || || ||||||||| Sbjct 23502 TCGTAAATACCCTCGATAGAGTCTTCTTTCATAGACACCAAGAAGCACGACGACATTTGC 23561 Query 48591 GGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGAT 48650 |||| | || || | |||||| | || || |||||||| | || || || || Sbjct 23562 GGATTAGGTGTGCCAGCATTAAACAGAGTCGGCGATGCATGTGTGAATGCCTTTTCAGAC 23621 Query 48651 AACAATTTATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATAC 48709 | | || ||||| ||||| || ||||| || || | || || || | || || Sbjct 23622 ATGTAGTTGTATGTCTCAATGGCACTTTCTATGTCTTCACCG-TGAATGCCAACAGCGAC 23680 Query 48710 ACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGA 48769 |||||| | ||| | ||||| | |||| ||| ||| ||| || ||| || || || Sbjct 23681 ACGCATGAGCATGTGCTGAGGCCGTTCAGCAACTTTTCCATTAATGCGCAAGAGGTAAGA 23740 Query 48770 TTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802 ||| | ||||| || ||||| ||||||| Sbjct 23741 GCGTTCTAGAGTTTTGAAGCCAAAGAAGTTGTA 23773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108006021320