Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq42 105 5e-18 seq50 95.1 9e-15 seq112 86.0 5e-12 >seq42 Length=207451 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 48551 CCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATC 48610 ||| | ||||| || || || ||| || || || ||||| ||| ||| | ||| | Sbjct 89028 CCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACC 89087 Query 48611 GTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTT 48670 ||| || | ||||||||| || || ||||| |||||||| |||| |||| ||||||||| Sbjct 89088 GTCTTCAAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTT 89147 Query 48671 GTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAAT 48730 ||| |||||| || ||| | | | || || | ||| ||||| | ||| || Sbjct 89148 GTCCTGAATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGAT 89207 Query 48731 CGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || |||||||| || || || || ||||| Sbjct 89208 CGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 89243 >seq50 Length=33972 Score = 95.1 bits (104), Expect = 9e-15 Identities = 162/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | ||| || | |||||| || || |||||||||||||||||||| || || Sbjct 33226 CGCCACCGCGTAGACGTAGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTATAGTCGC 33167 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 ||| | ||| | || || | ||| |||||||| || || || || |||||||| | | Sbjct 33166 TTAGTGTGCGACCATCTTCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCG 33107 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGC----C 48713 | | ||| |||||||| || | ||| | || || || || ||| Sbjct 33106 GGATGCCTTCCTTGTC-CTGAATTTTGGCCTT---GACGTTGTCGATGGTGTCGCTACTT 33051 Query 48714 TCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || | ||| || ||||| ||||| | ||||| |||||||||||||| Sbjct 33050 TCGACTTCGAGCGTGATGGTTTTCCCCGTGAGGGTTTTCACAAAAATCTGCAT 32998 >seq112 Length=388586 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || ||||| ||||| ||| ||| | || | || || | ||||||||| || || Sbjct 109855 CTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCGAGCTGCTTACCAGCGAA 109914 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 ||||| |||||||| |||| |||| ||||||||||| |||||| || ||| Sbjct 109915 GATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTCGCCTTGACATT 109974 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || |||| |||||||| | || ||||| || ||||||| || || || Sbjct 109975 CTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGAC 110034 Query 48755 AAAAATCTGCAT 48766 || | ||||| Sbjct 110035 GAACACTTGCAT 110046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937075377499