Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq113 132 6e-25 >seq113 Length=348542 Score = 132 bits (146), Expect = 6e-25 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| || || |||||||| |||||||| || || || | |||||| | |||||| || Sbjct 40208 GCCTTCGCATAGTCGCCCACTCGCCGCTCAAAGAAATTCGACTTGCCTTGGAGCGAAATG 40149 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||| | || ||||||||||| | || || | | | Sbjct 40148 TTCTCCATAAAGTCGAAGGGGTTTGTCGAGTTGTAGTGCTTCGGGTTGCCCAGAGCCACA 40089 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || ||||| || || |||||||| ||||| |||||||| || | || ||||| || ||| Sbjct 40088 AGAAGGCGATCCGCAACAAACTCAATGTATTGGCACATCAGCCTAGCATTCATACCAATG 40029 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 |||| || || |||| || ||| || || | |||||| || |||||||| Sbjct 40028 AGCGAGACAGGGAGCGCGTCTGTCAAGAAGTCCTGCTCGATATCAACGGCCTC 39976 Score = 116 bits (128), Expect = 5e-20 Identities = 181/259 (70%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||||||||| || ||||||| ||| || || || ||||||||||| | || ||| Sbjct 23337 TGGTCGACGTAACGAGCCGTGTTGTTGAAAACTCGAAGCATGGGCACAATTCCATTGCTT 23396 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | || || ||||| || | ||| | ||| | | || | ||||| | | ||| Sbjct 23397 ACTCCATTCGTGCCAGCAATGTATGAGCCTGTACCACGGATATTGTGGATGTTTAGACCG 23456 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 ||||| || |||| |||| || | || ||| ||||| |||||||| || |||||| Sbjct 23457 ATGCCACCAGCCGTCTTGCTTATCATAGCACACGTCTTGAGAGTGTCGTAAATACCCTCG 23516 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || ||||| | ||||| ||| | ||||||||||| ||||||| | | ||||| Sbjct 23517 ATAGAGTCTTCTTTCATAGACACCAAGAAGCACGACGACATTTGCGGATTAGGTGTGCCA 23576 Query 1630306 GCGTTGAAGAGCGTGGGCG 1630324 || || || || || |||| Sbjct 23577 GCATTAAACAGAGTCGGCG 23595 Score = 98.7 bits (108), Expect = 1e-14 Identities = 155/219 (71%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 |||||||| ||| || | || ||| || | || || ||||||||||| || ||| Sbjct 39893 CCTTCGTCACGAGAAATGAGCTCATTGGAGAACGACAGACCAGGCATGAGGCCACGTTTC 39834 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| ||| |||||||||||||||||||||||| || |||||| Sbjct 39833 TTGAGCCAGAAGATGGAAGCGAATGAGCCCGAGAAAAAGATGCCCTCGACCGCAGCAAAG 39774 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 | | || ||||| | || | | | || ||| |||||| || |||||| Sbjct 39773 GCAACAAGGCGCTCTGAGAACGAGGCACGGTGGTCC---GAGATCCAGCGCAGAGCCCAG 39717 Query 869360 TCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGC 869397 || ||||| | | | | |||| ||||| || ||||| || Sbjct 39716 TCAGCCTTCTGCTTGA-CGACTGGCACAGTCTCGATAGC 39679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107129926690821