Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq50 116 2e-21 seq112 89.7 3e-13 seq42 87.8 1e-12 >seq50 Length=33972 Score = 116 bits (128), Expect = 2e-21 Identities = 157/219 (72%), Gaps = 10/219 (5%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||||||| || ||||| |||||||| ||| |||| |||| Sbjct 33209 AGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTATAGTCGCTTAGTGTGCGACCATCT 33150 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || |||||||| || || ||||| || || |||| | || |||||||| Sbjct 33149 TCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGGGATGCCTTCCTTGTCC 33090 Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | ||||| |||||| |||| | ||| | | || |||| || | || | Sbjct 33089 TGAATTTTGGCCTTGACGTTGTCGATGGTGTCGCTACTTT-----CGACTTCGAGCGTGA 33035 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 |||| || ||||||||||| || ||||| |||||||||| Sbjct 33034 TGGTTTTCCCCGTGAGGGTTTTCACAAAAATCTGCATGA 32996 >seq112 Length=388586 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| ||||||||||||||| ||||| || | || |||| Sbjct 109835 AGCACGAGGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCC 109894 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||||||||| || || ||||| | || | ||||||||||| Sbjct 109895 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 109954 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || |||| || | || || || | ||| || | Sbjct 109955 TGAATCTTCGCCTTGAC--ATTCTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCG 110012 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| ||||| |||||||| || || | |||||| Sbjct 110013 TCTTGCCCGTCAGGGTCTTGACGAACACTTGCATG 110047 >seq42 Length=207451 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| ||| ||||||||| ||||| ||||| || |||| | || Sbjct 89032 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCGTCT 89091 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||||||||| || || ||||| | || | ||||||||||| Sbjct 89092 TCAAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 89151 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || | |||| || || ||| || || | || || ||| Sbjct 89152 TGAATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 89211 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || | ||||| || ||||| |||||| Sbjct 89212 TTGCCAGTCAAAGTCTTGACGAAGATTTGCATG 89244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692351459947