Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq113 183 4e-40 >seq113 Length=348542 Score = 183 bits (202), Expect = 4e-40 Identities = 373/542 (69%), Gaps = 18/542 (3%) Strand=Plus/Plus Query 1455743 CGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGA 1455802 ||||| ||||||||||| ||||| ||||| || ||| |||||||| || ||||| || Sbjct 39325 CGCTTCGTCCTGTTCCCAATCCGTTACCATGAAATCTGGCAAATGTAC-AAGAAGGCAGA 39383 Query 1455803 GGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTG-- 1455860 || || |||||||| || ||||| | ||| | | ||| | | |||||| Sbjct 39384 AGCATCATTTTGGACGGCTGAGGAAATTGACTTGTCCAAGGACCTGTACGACTGGGACAA 39443 Query 1455861 TCGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCA 1455919 ||| ||| ||| ||||| || || | | || || || || || || ||| || Sbjct 39444 TCGGATGACGGACCCTGAGCGTCACTTTGTGAGCCATGTACTTGCGTTCTT-CGCTGCAT 39502 Query 1455920 GCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCA- 1455978 ||||| || || |||||| |||| || || || | || ||||| |||| Sbjct 39503 CAGATGGTATTGTCAACGAGAATCTGGTCGAGCGGTTCAGTGCCGAAGTCCAG--GCCAC 39560 Query 1455979 -GAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTA 1456037 |||||||||| || || || ||||||||| || |||||||||||||| |||||||| Sbjct 39561 TGAGGCACGTTGCTTCTATGGCTTCCAGATCATGATGGAAAACATCCACTCCGAAACCTA 39620 Query 1456038 CTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGC 1456097 |||||| || || ||||| ||| | || || | ||| | || || Sbjct 39621 CTCGCTTCTTATTGACACGTACATTCGCGAGCCTGAACGCCGCGACTTTTTGTTCAATGC 39680 Query 1456098 CATCGACACGGTGCC-GTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACA 1456156 ||||| || ||||| |||| | | | | ||||| |||||||| || |||||| Sbjct 39681 TATCGAGACTGTGCCAGTCG-TCAAGCAGAAGGCTGACTGGGCTCTGCGCTGGATCTCGG 39739 Query 1456157 AGGA--GGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGCG-TCGAGGGCATC 1456213 | | | |||||| || | ||||| || || | |||||| ||| ||||||||||| Sbjct 39740 ACCACCGTGCCTCG----TTCTCAGAGCGCCTTGTTGCCTTTGCTGCGGTCGAGGGCATC 39795 Query 1456214 TTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGT 1456273 |||||||||||| ||| ||||||| ||||||||||| || ||||||||||| ||| Sbjct 39796 TTTTTCTCGGGCTCATTCGCTTCCATCTTCTGGCTCAAGAAACGTGGCCTCATGCCTGGT 39855 Query 1456274 CT 1456275 || Sbjct 39856 CT 39857 Score = 132 bits (146), Expect = 7e-25 Identities = 187/261 (72%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 259923 CGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGG 259982 |||| || || |||||||| ||||| || ||||| | ||||||||||| || || Sbjct 23595 CGCCGACTCTGTTTAATGCTGGCACACCTAATCCGCAAATGTCGTCGTGCTTCTTGGTGT 23536 Query 259983 ACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCT 260042 ||||| | || || |||||||| || || ||||| |||||| ||| || | || Sbjct 23535 CTATGAAAGAAGACTCTATCGAGGGTATTTACGACACTCTCAAGACGTGTGCTATGATAA 23476 Query 260043 CCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACG 260102 |||| |||| || ||||||||| | | ||||| | || | | ||| | ||| Sbjct 23475 GCAAGACGGCTGGTGGCATCGGTCTAAACATCCACAATATCCGTGGTACAGGCTCATACA 23416 Query 260103 TGGCGGGCACCAACGGCCAGTC--CAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | || ||||| || || ||| ||| || |||||||||||||||| ||||| ||| | Sbjct 23415 TTGCTGGCACGAATGG--AGTAAGCAATGGAATTGTGCCCATGCTTCGAGTTTTCAACAA 23358 Query 260161 CACGGCGCGCTACGTCGACCA 260181 |||||| || ||||||||||| Sbjct 23357 CACGGCTCGTTACGTCGACCA 23337 Score = 96.9 bits (106), Expect = 5e-14 Identities = 236/358 (66%), Gaps = 0/358 (0%) Strand=Plus/Minus Query 332867 CGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTG 332926 ||| ||||||||||||| ||||| || ||||| | | ||| |||| | | |||| Sbjct 178417 CGCCCAAAGCGCAGGATCGCACAGCGACTCTGAATCGGCTCAATGATCTTATTCGACTGA 178358 Query 332927 TTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCC 332986 ||||| || | |||||||||||| | || | ||||| || ||| | || Sbjct 178357 TTGCATGCAAAACAAAACCGCGTCGTTGGCGCATAGATCTCCATCGTGCGCCGTAACGCT 178298 Query 332987 TGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCG 333046 || || || | ||||| | || || ||||| || || | |||||||| || ||||| Sbjct 178297 TGCTGTGCACCGGGCGTCATGCTATCAGCCTCATCCAGCACAATGATCTTATGCCGCCCC 178238 Query 333047 TGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACG 333106 ||||||| || ||||| ||| |||||| | | ||||| || || | Sbjct 178237 GGCGGCAGCGACACTTTTTTCTGGGCAAATGCTTTGATCTTACTTCGCACCACATCAATA 178178 Query 333107 CCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGG 333166 ||||| || |||||||| || || || || || || || | | ||| | |||| | Sbjct 178177 CCGCGATCATCCGACGCATTTAGCTCCAGGACAGCTTCCTTGTAGGCGTCGCCCAGCAAT 178118 Query 333167 ACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCA 333224 || ||||||| || | ||||| ||||| || |||| || | |||| || || Sbjct 178117 GCGTGCGCCAGACAATGCACACTCGTCGTCTTTCCTATGCCTGGTAGCCCCGACAACA 178060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177800300942306