Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq113 215 6e-51 seq36 86.0 7e-12 >seq113 Length=348542 Score = 215 bits (238), Expect = 6e-51 Identities = 521/778 (67%), Gaps = 8/778 (1%) Strand=Plus/Minus Query 53179 GCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTG 53237 ||||||| | | ||||||| ||||| | || || |||||||| ||| || | ||| Sbjct 23702 GCCTCAGCACATGCTCATGCGTGTCGCTGTTGGCATTCACGGTGAAGACATAGAAA-GTG 23644 Query 53238 TCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGT 53297 | |||||| ||| ||| ||| ||||| || || || || |||| || |||| Sbjct 23643 CCATTGAGACATACAACTACATGTCTGAAAAGGCATTCACACATGCATCGCCGACTCTGT 23584 Query 53298 TCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATG 53357 | || ||||| || | | || || |||||| |||||| ||||| | ||||| || | Sbjct 23583 TTAATGCTGGCACACCTAATCCGCAAATGTCGTCGTGCTTCTTGGTGTCTATGAAAGAAG 23524 Query 53358 ACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGG 53417 |||| ||||| || || ||||| || |||||| |||||| || |||| | | | Sbjct 23523 ACTCTATCGAGGGTATTTACGACACTCTCAAGACGTGTGCTATGATAAGCAAGACGGCTG 23464 Query 53418 GTGGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 |||| |||||| | || | || |||||| | ||| || || || |||| Sbjct 23463 GTGGCATCGGTCTAAACATCCACAATATCCGTGGTACAGGCTCATACATTGCTGGCACGA 23404 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 | || || | ||||||| ||||| ||||| || || |||||||||||||| || |||| Sbjct 23403 ATGGAGTAAGCAATGGAATTGTGCCCATGCTTCGAGTTTTCAACAACACGGCTCGTTACG 23344 Query 53538 TCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCAC 53596 || |||| || || || || | ||| | |||| ||||| || || |||||||||||| Sbjct 23343 TCGACCAAGGCGGCAACAAACGACCAGGTG-CGTTTGCCATTTATCTGGAGCCGTGGCAC 23285 Query 53597 GCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC 53656 | || | | || || | || || ||| || || || | || ||| | ||| Sbjct 23284 CCTGATGTGTTTGAATTCGTGGATCTTCGTAAAAACCATGGAAAGGACGAGGTTCGCGCA 23225 Query 53657 CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716 || || |||| || ||||| | || ||||| |||||| | || |||||| | Sbjct 23224 CGCGATTTGTTCCTGGCCATGTGGGTGCCAGACCTTTTCATGAAGCGTGTTGAGAAGAAT 23165 Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776 ||||| |||| || ||||| || || || || || | | |||||| ||| Sbjct 23164 GAGGATTGGTCTCTTATGTGTCCAGCTGAAGCACCAGGTCTTGCTGATTGCTACGGCGAG 23105 Query 53777 GAGTTTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGA-AGGTCA 53834 ||||| | ||| | ||| | ||| || | | |||| || | ||| | || |||| Sbjct 23104 GAGTTCGAAGAGCTTTAT-GAACGTTATGAGCGTGAGGGTCG-TGCAAAACGATCCGTCA 23047 Query 53835 AGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACA 53894 |||| | || | ||| |||| || || || || | |||||||| | |||| || Sbjct 23046 AGGCCCAGAAGCTGTGGTATGCCATTCTGGAGGCTCAAATAGAGACGGGCAATCCGTTCA 22987 Query 53895 TGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 ||| ||||| ||| ||| |||| || || || ||||||||| ||||| ||||| Sbjct 22986 TGTTATACAAAGATGCGGCCAACCGCAAAAGTAATCAGAAGAACCTCGGCACGATCAA 22929 Score = 84.2 bits (92), Expect = 2e-11 Identities = 298/456 (65%), Gaps = 11/456 (2%) Strand=Plus/Minus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 ||||| |||||||| ||||| | || |||||||| || || || || ||| ||| | Sbjct 22417 GGCCTTCGCAACTCGCTGCTTCTTGCACCAATGCCTACGGCTTCAACAAGTCAAATCCTT 22358 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597 || ||||||| |||||||||||||| | |||||| ||| |||| || ||| || Sbjct 22357 GGGTTCAACGAGTGCTTCGAGCCGTACACTAACAACATTTACATGCGACGTGTCCTCGCT 22298 Query 55598 GGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCT-GCAGAAGATCAACAAGTG 55656 || ||||| | ||||| | ||| | ||| || | ||| | | || Sbjct 22297 GGCGAGTTCCAAGTCGTCAACCCGTGGCTCTTGCGGGAGCTCGTGGAACTTGGTC-TTTG 22239 Query 55657 GAACCCGCAGATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCAGAAT----CTGG 55712 ||| ||| ||| | | || | | || ||||| |||||||| |||| Sbjct 22238 GAATGATTCGATGAAGCAGAAAATCATTGCACATGGCGGGTCGATCCAGAATATACCTGG 22179 Query 55713 AGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGT- 55771 ||||| | |||||| | ||| ||| |||||||| ||| ||||| ||| Sbjct 22178 -CATTCCCGACCACATCAAGGCCCTGTACAAGACTGTGTGGGAAATTAGCCAGAA-AGTG 22121 Query 55772 CTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATC 55831 | ||||| ||| |||||||||||| || | | ||| ||| |||||| ||| Sbjct 22120 ATTATTGATATGGCTGCTGATCGTGGCGCCTTTGTGTGCCAAAGCCAAAGTCTGAATATC 22061 Query 55832 TTCATG-GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAA 55890 | || | | | ||||| || ||| ||||||||||||||||| |||||||| Sbjct 22060 CACCTGAGTGCGCCGAGTTTTGGCC-AGCTGACGTCGATGCACTTTTACGGCTGGAAGAA 22002 Query 55891 GGGACTCAAGACGGGTATGTACTATCTGCGGACCCG 55926 ||| || ||||| || |||||| |||| || || Sbjct 22001 GGGTCTTAAGACTGGCTCGTACTACTTGCGCACTCG 21966 >seq36 Length=1575439 Score = 86.0 bits (94), Expect = 7e-12 Identities = 184/271 (68%), Gaps = 8/271 (3%) Strand=Plus/Plus Query 117304 AGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGA--CGCGTACCGAAT 117361 |||||| |||||||||| || || |||||||||||||| || | || | || ||| Sbjct 862048 AGTGAAGATGTAACGAGCACTGGCCGCATCCTTGCCACC--CATGCTTCGAGAGCCAAAT 862105 Query 117362 TGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTG 117421 ||||| ||||| | | |||| ||||| ||| ||||| ||| || | | Sbjct 862106 TGTCCGTTCGGCATGAGCAAATTCACATTGTTACTGCCGCAAAAGTCTTGCGCGAGACCG 862165 Query 117422 ACAATCGTACCTTGG--AGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGT 117479 || ||||| | ||| || | || |||||||||||||||| ||||| | ||| | Sbjct 862166 ACGATCGT--CATGGTCAGAGCCTGATCGCCATGGTGATACGCCGAATGCTCGGACACAT 862223 Query 117480 AGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAA 117539 ||||| || ||| ||||| || |||| | | || || ||| | || | | Sbjct 862224 AGCCCTGGAGTTGATGGACCTTGATTTCTGTCTTGAGCTTGCGCTTAAAACAACTGAAGA 862283 Query 117540 TCACCTTGCGCTGACTTGGCTTCAGACCATC 117570 ||||||| ||||| | |||||| || ||||| Sbjct 862284 TCACCTTCCGCTGTCCTGGCTTGAGTCCATC 862314 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 119090 AGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCCTCGTCGTTGTAGTTG 119149 ||||| |||||| |||| ||||||||||| ||||| | ||| || |||| |||||| Sbjct 863972 AGCTTCGCACCGAATCCATTCCGACCACCTGTCACCTTCGCCTCGTCATCGTCGTAGTTT 864031 Query 119150 GAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 || ||||| || | |||||||||||||||||| || Sbjct 864032 GACGATGTCAACAGATTCCCAAAGATGAGCTCGGGTAT 864069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215227057400