Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq42 152 1e-31 seq112 149 1e-30 seq108 134 3e-26 seq50 107 5e-18 >seq42 Length=207451 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| || || ||| | || ||| Sbjct 89032 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCGTCT 89091 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || |||||||| || ||||| || |||||||| Sbjct 89092 TCAAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 89151 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| || || ||||| |||| || || || | |||||||||| Sbjct 89152 TGAATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 89211 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | ||| | |||||| Sbjct 89212 TTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 89243 >seq112 Length=388586 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| | || || || || || | ||||| || || ||| | ||||| Sbjct 109835 AGCACGAGGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCC 109894 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || |||||||| || |||||||| |||||||| Sbjct 109895 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 109954 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| || || ||||| || | |||||| || | ||||||||| Sbjct 109955 TGAATCTTCGCCTTGACATTCTCAATCGTGTCCGACGATTCCACCTCGAGGGTGATCGTC 110014 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||| || || | |||||||||||| Sbjct 110015 TTGCCCGTCAGGGTCTTGACGAACACTTGCAT 110046 >seq108 Length=572 Score = 134 bits (148), Expect = 3e-26 Identities = 190/267 (71%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 7453 ATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGGTTAGAA 7512 || |||| || || || ||| || ||||||| ||| ||| | |||| | | ||| Sbjct 291 ATCTTTGCTGTATTCTCAGGTCTTGCAGGTACTGCATTCTCTGTACTTATCCGTATGGAA 232 Query 7513 TTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACGTTATTATT 7572 || |||| || ||| | ||| | | |||||| || || | |||||||| ||| Sbjct 231 CTATCTGCACCTGGTACACAAGTTCTTGCTGGTAACCATCATCTATTTAACGTTATCATT 172 Query 7573 ACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTC 7632 || || ||||| || ||||||||||||| | |||||||| | | | || || ||||| Sbjct 171 ACTGCTCATGCATTCCTTATGATTTTCTTCATGGTTATGCCTGCTCTAATGGGTGGTTTT 112 Query 7633 GGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAAC 7692 || || | ||||| || ||||| |||||||||||||||||||| | || | || ||| Sbjct 111 GGTAACTACTTCGTACCAGTAATGGTTGGTGCTCCTGATATGGCTATGCCTCGACTAAAC 52 Query 7693 AATATAAGTTTTTGATTACTACCGCCT 7719 || || ||||| || |||| || ||| Sbjct 51 AACATTAGTTTCTGGCTACTTCCTCCT 25 >seq50 Length=33972 Score = 107 bits (118), Expect = 5e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| |||||| |||||||| | ||| || ||| | || | |||||| Sbjct 33209 AGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTATAGTCGCTTAGTGTGCGACCATCT 33150 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || ||||| ||||| |||||||| || ||||| || ||||||||||| Sbjct 33149 TCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCGGGATGCCTTCCTTGTCC 33090 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||| || ||||||||||| |||| || || | |||||| || Sbjct 33089 TGAATTTTGGCCTTGACGTTGTCGATGGTGTCGCTACTTTCGACTTCGAGCGTGATGGTT 33030 Query 225682 TTGCCCGTCAAAGTTTT 225698 || ||||| | ||||| Sbjct 33029 TTCCCCGTGAGGGTTTT 33013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529473438422