Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq50 159 8e-34 seq112 141 2e-28 seq42 129 1e-24 >seq50 Length=33972 Score = 159 bits (176), Expect = 8e-34 Identities = 148/188 (79%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| |||||||| ||||| || ||||| ||||| ||||| || ||||| ||| Sbjct 33001 CAGATTTTTGTGAAAACCCTCACGGGGAAAACCATCACGCTCGAAGTCGAAAGTAGCGAC 33060 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| || ||||||||||| ||||| ||||| || || || ||| Sbjct 33061 ACCATCGACAACGTCAAGGCCAAAATTCAGGACAAGGAAGGCATCCCGCCTGATCAACAA 33120 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| |||||||| |||||||| |||||||| | || || ||| ||||| | Sbjct 33121 CGCCTTATTTTCGCCGGTAAACAGCTTGAAGATGGTCGCACACTAAGCGACTATAATATT 33180 Query 178104 CAAAAAGA 178111 |||||||| Sbjct 33181 CAAAAAGA 33188 >seq112 Length=388586 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || || || || || ||||||||||||||||||||| || ||| Sbjct 110043 CAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCGGAC 109984 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| ||||| |||||||||||||| || || || ||||||||||| || Sbjct 109983 ACGATTGAGAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAACAG 109924 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| ||||| | ||||| || || ||| | Sbjct 109923 CGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACTCTGAGTGACTACAACATT 109864 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || |||| || || Sbjct 109863 CAGAAGGAGTCGACCTTGCACCTCGT 109838 >seq42 Length=207451 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | || || || |||||||| |||||||| || ||| ||| Sbjct 89240 CAAATCTTCGTCAAGACTTTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCGGAC 89181 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || || ||||||||||| || Sbjct 89180 ACGATTGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 89121 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| ||||| || | ||||| || || ||| || Sbjct 89120 CGTCTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGAGTGACTACAACATC 89061 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 89060 CAGAAGGAGTCGACCCTTCACCTGGT 89035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729457222922