Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264805.1_202015-08-11] 113 sequences; 8,940,368 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq50 143 2e-29 seq112 127 2e-24 seq42 127 2e-24 >seq50 Length=33972 Score = 143 bits (158), Expect = 2e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||||||||||| ||||| || || |||||||| || ||||| ||||||||| Sbjct 33226 CGCCACCGCGTAGACGTAGCACCAAGTGAAGAGTGCTCTCTTTTTGAATATTATAGTCGC 33167 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 || ||||| | || || ||||| || |||||||| || ||||| ||||| || | | Sbjct 33166 TTAGTGTGCGACCATCTTCAAGCTGTTTACCGGCGAAAATAAGGCGTTGTTGATCAGGCG 33107 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | || ||||||||| ||| |||| || | ||| | | | |||||||| || Sbjct 33106 GGATGCCTTCCTTGTCC-TGAATTTTGGCCTTGACGTTGTCGATGGTGTCGCTACTTTCG 33048 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || | ||| || ||||| ||||| || || || || |||||||||||| Sbjct 33047 ACTTCGAGCGTGATGGTTTTCCCCGTGAGGGTTTTCACAAAAATCTGCATG 32997 >seq112 Length=388586 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || | ||| | ||| || |||| || ||||||||||||||| ||||| Sbjct 109820 CCACCACGCAAACGAAGCACGAGGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCACTC 109879 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || ||||||||||| || ||||| ||||||||||||||||||| ||| Sbjct 109880 AGAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 109939 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || | ||| | | | ||||| ||| ||||| Sbjct 109940 ATACCCTCCTTGTCC-TGAATCTTCGCCTTGACATTCTCAATCGTGTCCGACGATTCCAC 109998 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || ||||| || |||||||| ||||| ||||| | |||||| Sbjct 109999 CTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCATG 110047 >seq42 Length=207451 Score = 127 bits (140), Expect = 2e-24 Identities = 157/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 |||||| || || || ||||||||| ||||| ||||| || ||||| |||| || Sbjct 89034 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCGTCTTC 89093 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| ||||| ||||||||||||| |||| || |||||||||| | Sbjct 89094 AAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC-T 89152 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | || | | | ||||| ||||| ||||| | ||| ||||| | Sbjct 89153 GAATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCT 89212 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || |||| ||||| ||||| || |||||| Sbjct 89213 TGCCAGTCAAAGTCTTGACGAAGATTTGCATG 89244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303346995600