Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq137 131 2e-25 seq107 114 1e-20 seq86 107 2e-18 >seq137 Length=390227 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 ||||| | ||| | ||||| || |||||||||||| ||||| ||| |||||| || Sbjct 280095 AAACGAAGCACGAGGTGCAACGTTGACTCCTTTTGAATGTTGTAGTCACTCAGAGTACGG 280036 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 | || || || ||||| |||||||| || || ||||| ||||| | || | | |||| Sbjct 280035 CCATCCTCGAGTTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCC 279976 Query 43086 TTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 43144 |||||| ||| |||| | |||| || | | |||||| ||||||||| |||| || Sbjct 279975 TTGTCC-TGAATTTTCGCCTTGACATTCTCAATCGTGTCCGACGATTCCACCTCGAGGGT 279917 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || |||||||| || ||||| || || | |||||| Sbjct 279916 GATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCAT 279878 >seq107 Length=33973 Score = 114 bits (126), Expect = 1e-20 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | |||||| || | |||||||| |||||||||||||| || Sbjct 782 CCCCCGCGTAGACGTAGCACCAAGTGAAGGGTGCTCTCTTTTTGAATATTGTAGTCGCTT 841 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||| || | || || ||||||||||| ||||| || || || || || || | ||| Sbjct 842 AAAGTGCGGCCATCTTCAAGCTGCTTACCGGCGAAGATAAGGCGTTGTTGATCCGGCGGA 901 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | || ||||||||| ||| |||| | |||| ||| | | | || ||||| ||| | Sbjct 902 ATGCCTTCCTTGTCC-TGAATTTTGGCCTTGA-CGTTGTCGATGGTATCGCTACTTTCGA 959 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||| ||||||||| || || || || || || ||||| || ||||| Sbjct 960 CTTCGAGCGTGATGGTCTTTCCAGTGAGGGTTTTCACAAAAATCTGCAT 1008 >seq86 Length=214995 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||| |||||| || |||| || ||||||||||||||||| Sbjct 125737 CTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCGTCTTCAAGCTGCTTACCAGCGAA 125678 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||| ||||| | || | || |||||||| | ||| | || | || | Sbjct 125677 GATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGT-CTTGAATCTTGGCCTTCACAT 125619 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || || || |||| |||||| || ||||| || | ||||| | Sbjct 125618 TGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAAGGTCTTGA 125559 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 125558 CGAAGATTTGCAT 125546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816613614640