Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq113 122 6e-23 seq107 95.1 8e-15 seq86 86.0 4e-12 >seq113 Length=631273 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||||||||| | ||||| || || | || ||| ||||| || |||||||| | Sbjct 468926 CCGCCGCGCAGGCGAAGCACAAGATGCAGTGTCGATTCCTTCTGGATATTGTAGTCACTC 468867 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || ||||||||||| || |||||||| | ||||| |||||| ||| Sbjct 468866 AGCGTACGTCCATCCTCCAACTGCTTACCGGCGAAAATCAAGCGCTGTTGGTCGGGGGGA 468807 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||| || || || ||||| | | | |||| |||| || ||||| Sbjct 468806 ATGCCTTCCTTATCTTGGATTTTGGCCTTTACGTTGTCGATCGTGTCGGATGACTCGACC 468747 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| ||||||||||| || || || || || |||||||| Sbjct 468746 TCAAGCGTGATTGTTTTGCCGGTCAGTGTCTTGACGAAAATCTGCAT 468700 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||| || || | || ||| ||||| || |||||||| | Sbjct 468698 CCACCACGCAGGCGAAGCACAAGATGCAGTGTCGATTCCTTCTGGATATTGTAGTCACTC 468639 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || |||||||||||||| |||||||| | ||||| |||||| ||| Sbjct 468638 AGCGTACGTCCATCCTCCAACTGCTTGCCGGCGAAAATCAAGCGCTGTTGGTCGGGGGGA 468579 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||| || || || ||||| | | | |||| |||| || ||||| Sbjct 468578 ATGCCTTCCTTATCTTGGATTTTGGCCTTTACGTTGTCGATCGTGTCGGATGACTCGACC 468519 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| ||||||||||| | || || || || || ||||| Sbjct 468518 TCAAGCGTGATTGTTTTGCCGGTCAATGTCTTGACGAAAATTTGCAT 468472 >seq107 Length=33973 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG-- 34220 || ||||| || | ||||||| ||| | || || ||||| || || ||||||||| Sbjct 782 CCCCCGCGTAGACGTAGCACCAAGTGAAGGGTGCTCTCTTTTTGAATATTGTAGTCGCTT 841 Query 34221 ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280 | || || ||| | || || | |||||| || ||||| || || || || || || | Sbjct 842 AAAG-TG-CGGCCATCTTCAAGCTGCTTACCGGCGAAGATAAGGCGTTGTTGATCCGGCG 899 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTC 34338 | | || |||||||| || ||||| ||| | | | | || | |||| | ||| Sbjct 900 GAATGCCTTCCTTGTC--CTGAATTTTGGCCTTGACGTTGTCGATGGTATCGCTACTTTC 957 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||| || | ||||||||| || || ||||| ||||||||||| |||||||| Sbjct 958 GACTTCGAGCGTGATGGTCTTTCCAGTGAGGGTTTTCACAAAAATCTGCAT 1008 >seq86 Length=214995 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | || || ||||| ||||||||||| ||| || |||| Sbjct 125757 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCGTCT 125698 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| || || ||||| ||||| || | || ||||||||| Sbjct 125697 TCAAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCT 125638 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | |||| || | || || || || | |||||| || Sbjct 125637 TGAATCTTGGCCTTCACATTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 125578 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGC 34392 ||||| || | || || || ||||| ||||| || Sbjct 125577 TTGCCAGTCAAGGTCTTGACGAAGATTTGCATGGC 125543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071456633280