Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq83 340 2e-88 seq113 122 8e-23 seq137 116 3e-21 >seq83 Length=277254 Score = 340 bits (376), Expect = 2e-88 Identities = 1220/1882 (65%), Gaps = 64/1882 (3%) Strand=Plus/Plus Query 22112 ACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTCTTC 22171 || ||||| || || ||| | || || || ||||| | || ||| ||| ||||| Sbjct 27409 ACAGTAAATTGAATAGCGCTGGCTGCTGGACGAGTGCGCAAGTAGTACGAGCCAGTCTTA 27468 Query 22172 AGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG------C 22225 ||||| ||||||| ||||||| || |||||||||| | ||| ||||||| | Sbjct 27469 AGACCTTTCTTCCAGCCGTAAAAGTGCATCGACGTCAGCTGGCCAAAACTCGGTGCACTC 27528 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 | || |||| || | | ||||| || | ||| || || ||||| || ||| Sbjct 27529 AGGTGGATGTTCAGACTT------TGACTTTGGCACACAAAGGCGCCACGATCAGCAGCC 27582 Query 22286 ATATTTATCAATGTACGCATC--GAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGAT 22341 |||| ||||| | | | ||| |||||||| |||||||||||||| | | || Sbjct 27583 ATAT----CAATGATCACTTTCTGACTGATTTCCCACACGGTCTTGTACAGGGCCTTAAT 27638 Query 22342 CTCTAACGGTAT--CGATTCGATCCTCTGGACGGACCCGTTATTGTGTA-TGATCAAATT 22398 | || || | | || |||||| |||||| || ||| | |||| | Sbjct 27639 GTGGTCGGGAATGCCAGGTACAT--TCTGGATCGACCCGCCAT-GTGCAATGATTTTCTG 27695 Query 22399 TTTAATCGTATCGTTCCACAAACCGATGGCGGTCAA--ATCTTTGACCAGATG-ACGG-T 22454 || |||| ||| ||||| | ||| | | || | | || | ||| |||| | Sbjct 27696 CTTCATCGAATCATTCCAAAGACCCA----GTTCCACGAGCTCCCGCAAGAGCCACGGGT 27751 Query 22455 TCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTT 22514 | || ||||| |||||||| | | ||| || || |||||||||| ||| | |||| Sbjct 27752 TGACGACTTGGAACTCGCCAGCGAGGACACGTCGCATGTAAATGTTGTTAGTGTATGGTT 27811 Query 22515 CGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACA 22574 |||| | || ||| || || || ||| || ||||| || ||||| || || | | Sbjct 27812 CGAAGCACTCGTTGAACCCAAGGATTTGACTTGTTGAAGCCGTGGGCATTGGTGCAAGAA 27871 Query 22575 GTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACA 22634 | |||||||| | | ||| |||| | ||| || ||| || | ||| ||||||| Sbjct 27872 GCAGCGAGTTGCGAAGGCCATGCTGGGCAATCTTGGCCTTTAGTGATGCCCAATCCCACA 27931 Query 22635 GATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGC 22694 |||| || || || |||||| ||||||||||| | ||| || ||||| | Sbjct 27932 AGTCGGTGGGAGTGCGGTT---CCACATGTCGTATTGCAAGATGCCTTGAGAAGCCGGAC 27988 Query 22695 TGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCA-GCTCGCCTCCAAC 22753 | |||| ||| |||||||||| ||||| | || || ||||| | ||| || | Sbjct 27989 TTCCTTGGTATGTTTCGTACGTGCCATACTGTTCTGCGAGCTCGCATGAACGC-TCGAGT 28047 Query 22754 GCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCGGCGACGCTTTC 22812 ||| ||| || || |||||||| || | | ||||| ||||| || | ||| || Sbjct 28048 GCGGCGTGGTAGATGGTCTCGAAAATCTGCAGGTTCAGA-CGGCGTGCTTCTTGGCTGTC 28106 Query 22813 GTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGG 22872 |||| || ||| |||| ||| || || |||| |||||| || || || || || || Sbjct 28107 AAACGGATAACCCATGATCATGAATGCATCAGCCAGACCCTGTACACCAATTCCAATGGG 28166 Query 22873 TCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGT 22932 |||| || ||| || || || | || || | || |||||| | Sbjct 28167 ACGGTGGCGCATATTTGAGCGCCGGGCGCTAGGAACTGGGTAGTAGTTGATATCGAT-GA 28225 Query 22933 TCTGTTCAAGTTTCTGGT-CACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAA 22991 || | | || |||| | ||| | ||| | | | |||| ||| | Sbjct 28226 TCCGATTGAGATTCTTGCACACGACTTTAGCAACATCGTGCAACCGCTGGAAGTTGTATA 28285 Query 22992 ---------CGCCCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATA 23042 |||| | | | ||| ||| || | || || ||||| || || || | Sbjct 28286 TTTTCGAGGCGCCAGTTCCTTCAATAAATGTGGGCAGTGCAATAGAGGCTAGGTTACACA 28345 Query 23043 CGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTA 23102 | ||| ||| ||| || |||| || | |||||||||||| || ||| | ||| | Sbjct 28346 CTGCCGTCTCCTCTGGCGAACTGTATTCGATAATTTCGGTACAGAGGTTGGAGCTCTTGA 28405 Query 23103 TCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACG 23162 ||||||| | || |||| || ||||| || ||| || ||| ||||| | |||| ||| Sbjct 28406 TCGTGCCGAGGTTTTTCTGATTACTTTTGCGGTTGGCCGCATCTTTGTATAACATGAACG 28465 Query 23163 GCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACAC 23222 | |||||||||| | || | ||| | || || ||||| |||| || | || Sbjct 28466 GATTGCCCGTCTCTATTTGAGCCTCCAGAATGGCATACCACAGCTTCTGGGCCTTGACGG 28525 Query 23223 GTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282 ||| | || || ||| || || || | | | || || || | |||| Sbjct 28526 ATCGTTTTGCACGACCCTCACGCTCATAACGTTCATAAAGCTCTTCGAACTCCTCGCCGT 28585 Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACA-TTGAGTCATT 23340 | || || || || || || | || || | |||||||| ||| ||| || | || || Sbjct 28586 AGCAATCAGCAAGACCTGGTGCTT-CAGCTGGACACATAAGAGACCAATCTTCATTC-TT 28643 Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 || || || |||| ||||| || || | ||| | || ||||| ||||| ||||| Sbjct 28644 CTCGACACGCTTCATGAAAAGGTCTGGCACCCACATGGCCAGGAACAAATCGCGTGCGCG 28703 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 ||||| || || || ||| || | ||||| || || || || || | ||||| Sbjct 28704 AACCTCGTCCTTTCCATGGTTTTTACGAAGATCCACGAATTCAAATACATCAGGGTGCCA 28763 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 ||||| ||||||| ||||||||| || |||| ||||||||||||||| ||||||||||| Sbjct 28764 TGGCTCCAGGTAAATGGCAAACGCACCTGGTCGCTTATTGCCGCCCTGGTCGACGTAACG 28823 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 ||||||||||| | |||| ||||| ||||||| || ||| | || ||| Sbjct 28824 AGCCGTGTTGTTAAAAACTCGAAGCATGGGCACGATTCCATTGCTTACTCCATTAGTGCC 28883 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | ||| ||| | |||| | ||||| | || | ||| ||||| || ||| Sbjct 28884 AGCAATGTACGAGCCTGTACCTCGGATATTGTGGATGTTTAGACCGATGCCACCAGCCGT 28943 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || |||||| || || || ||||||||||| |||||||| || ||| ||||| Sbjct 28944 CTTGCTTATCATGGCACACGTCTTGAGAGTGTCGTAAATGCCCTCAATAGAGTCTTCTTT 29003 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | | || ||||| ||||| |||||||||| || ||||| | || || || || Sbjct 29004 CATAGACACTAAGAAGCACGACGACATTTGCGGATTAGGCGTGCCAGCATTAAATAGAGT 29063 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTC-GACAT-TAGATTGTACGTGTCGATGGCGGCA 23818 ||| || || || || | | ||| ||||| ||| ||||| || || ||||| Sbjct 29064 CGGCGATGCATGTGTGAA-TGCCTTTTCAGACATGTAG-TTGTATGTCTCAATGGCACTT 29121 Query 23819 TCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878 |||||||| || ||||| || || | ||||| ||||| | ||||| ||||| | ||| Sbjct 29122 TCAATGTCTTCACCGTGAATTCCAACAGCGACACGCATGAGCATGTGCTGAGGCCGTTCG 29181 Query 23879 --ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAAT 23936 | | | | || ||||| || || || || |||| | ||||| || ||||| Sbjct 29182 GCAACTTTA--CCATTAATGCGCAAGAGGTAAGAGCGTTCTAGAGTTTTGAAGCCAAAGA 29239 Query 23937 AGTCATAGTTAAAGTCACGATC 23958 ||| |||| || ||||| || Sbjct 29240 AGTTGTAGTGGAAATCACGCTC 29261 >seq113 Length=631273 Score = 122 bits (134), Expect = 8e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| ||||| |||| |||||||| ||||| | || || || | || Sbjct 468471 CATGCAAATTTTCGTCAAGACATTGACCGGCAAAACAATCACGCTTGAGGTCGAGTCATC 468530 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | ||| || ||||||||| | || |||||||| Sbjct 468531 CGACACGATCGACAACGTAAAGGCCAAAATCCAAGATAAGGAAGGCATTCCCCCCGACCA 468590 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||||| | || ||||| ||||| |||||||| || | | | || |||| || || | Sbjct 468591 ACAGCGCTTGATTTTCGCCGGCAAGCAGTTGGAGGA-TGGACGTACGCTGAGTGACTACA 468649 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | || || || |||||||| || ||||| || ||| | ||| | || |||| Sbjct 468650 ATATCCAGAAGGAATCGACACTGCATCTTGTGCTTCGCCTGCGTGGTGGTA 468700 >seq137 Length=390227 Score = 116 bits (128), Expect = 3e-21 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||| | ||||| ||||| ||||| ||||| ||||||||| |||| || ||| |||| Sbjct 279877 CATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCGTC 279936 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| || ||| ||||||||| || | || || ||||| Sbjct 279937 GGACACGATTGAGAATGTCAAGGCGAAAATTCAGGACAAGGAGGGTATTCCTCCGGACCA 279996 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||| || || ||||||||||| || | || || ||| |||| || || || Sbjct 279997 ACAGCGCCTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACTCTGAGTGACTACAA 280056 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 ||||||||| || || || | || || || ||| | || | || ||| ||||||| Sbjct 280057 CATTCAAAAGGAGTCAACGTTGCACCTCGTGCTTCGTTTGCGCGGTGGTGCCAAGAAGCG 280116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765631052960