Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq83 158 2e-33 >seq83 Length=277254 Score = 158 bits (174), Expect = 2e-33 Identities = 386/581 (66%), Gaps = 8/581 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 ||||| || ||| || || || ||||| | | ||| | || || || |||| || Sbjct 45489 CATGCAAAGTCGGTATGAAGGCCTTCGTCGCGAGAAATGAGCTCATTGGAGAACGACAGA 45430 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||| |||||||| || || ||||| || |||||||||||||| || || || ||| Sbjct 45429 CCAGGCATGAGGCCACGTTTCTTGAGCCAGAAGATGGAAGCGAATGAGCCCGAGAAAAAG 45370 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGC---GCTGTCATG 33757 || || || || ||||||||||||| ||| | |||| | ||| ||| | ||| Sbjct 45369 ATGCCCTCGACAGCAGCAAAGGCAACAAGGCGCTCT-GAGAACGAGGCACGGTGGTCCGA 45311 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||| | ||||||| || ||||||| || || |||| || || || ||||| Sbjct 45310 GATCCAACGTAGAGCCCAGTCAGCCTTCTGCTTCACGACTGGCACTGTCTCAATAGCATT 45251 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 || | | ||| | | || || || || || || | ||| || | Sbjct 45250 GAACAAAAAGTCGCGGCGTTCAGGCTCGCGAATGTACGTGTCAATAAGAAGCGAGTAGGT 45191 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 ||| || || |||||||| || ||||| || || ||||| || | ||||| || Sbjct 45190 TTCAGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAGAAGCAACGTGCCTCAGTGGC 45131 Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997 ||| ||||| | | || || || | | ||| || || || || ||||| ||||| Sbjct 45130 CTGGACTTCGGCGCTGAACCGCTCGACCAGATTCTCGTTGACAATACCATCTGATGCTGC 45071 Query 33998 AAAAAACGCCAATACATGTTTTATAAAATATTTTTC---GTCTGGTGTTAGTTTATTCCA 34054 ||| ||||| | |||||| | | || | || ||| | | | || | ||| Sbjct 45070 AAAGAACGCAAGTACATGGCTCACGAAGTGACGCTCGGGGTCCGTCATCCGATTGTCCCA 45011 Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114 || | | || || || | || | ||| || | |||||||||||||| |||||||| Sbjct 45010 GTCGTACAGGTCCTTGGACAAGTCAATTTCCTCGGCCGTCCAAAATGATGCTTCTGCCTT 44951 Query 34115 TTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAA 34155 || ||||| | |||||| ||||| || |||||||||||| Sbjct 44950 CTTGTACATTTGCCAGATTTCATGGTAACGGATTGGGAAAA 44910 Score = 154 bits (170), Expect = 2e-32 Identities = 655/1013 (65%), Gaps = 34/1013 (3%) Strand=Plus/Plus Query 63227 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAG 63283 |||| | |||||||| | ||||| ||| |||| |||| || || ||||| || || Sbjct 28608 TTCAGCTGGACACATAAGAGACCAATCT---TCATTCTTCTCGACACGCTTCATGAAAAG 28664 Query 63284 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATT 63343 || || | ||| | || | || | ||| | || | | || || ||||| || Sbjct 28665 GTCTGGCACCCACATGGCCAGGAACAAATCGCGTGCGCGAACCTCGTCCTTTCC---ATG 28721 Query 63344 CTTTTTA---AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400 |||||| ||||| | ||| | | | ||||| ||||| || |||| ||| ||||| Sbjct 28722 GTTTTTACGAAGATCCACGAATTCAAATACATCAGGGTGCCATGGCTCCAGGTAAATGGC 28781 Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460 | | || || || || || || ||||| || | ||| | ||| ||||| ||| |||| Sbjct 28782 AAACGCACCTGGTCGCTTATTGCCGCCCTGGTCGACGTAACGAGCCGTGTTGTTAAAAAC 28841 Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA---GCCTCC 63517 || | ||| || | || || || || ||||| || || | || || |||| Sbjct 28842 TCGAAGCATGGGCACGATTCCATTGCTTACTCCATTAGTGCCAGCAATGTACGAGCCTGT 28901 Query 63518 ACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63577 || | || ||||| || |||||| || || || ||| | || || | || Sbjct 28902 AC---CTCGGATATTGTGGATGTTTAGACCGATGCCACCAGCCGTCTTGCTTATCATGGC 28958 Query 63578 GCATCGTTTTAAC-GTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAA 63636 || ||| || | ||||| || ||||| || || || || |||| | || | Sbjct 28959 ACA-CGTCTTGAGAGTGTCGTAAATGCCCTCAATAGAGTCTTCTTTCATAGACACTAAGA 29017 Query 63637 AACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63696 | || |||||||| || || || || |||||||||| || || || || || | Sbjct 29018 AGCACGACGACATTTGCGGATTAGGCGTGCCAGCATTAAATAGAGTCGGCGATGCATGTG 29077 Query 63697 TAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTG 63754 | || |||||||| | |||| ||||| |||||||| || || || || || | Sbjct 29078 TGAATGCCTTTTCAGACATGTAG-TTGTATGTCTCAATGGCACTTTCAATGTCTTCACCG 29136 Query 63755 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTT 63814 |||||||| || ||||||||||| | |||||||||||| | ||| ||| ||| || Sbjct 29137 -TGAATTCCAACAGCGACACGCATGAGCATGTGCTGAGGCCGTTCGGCAACTTTACCATT 29195 Query 63815 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGT 63873 || ||| | ||| || ||| | |||||| || ||||| ||||||| || ||| | Sbjct 29196 AATGCGCAAGAGGTAAGAGCGTTCTAGAGTTTTGAAGCCAAAGAAGTTGTAGTGGAAA-T 29254 Query 63874 CTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGG 63933 | || || || || ||| | || | || || || ||| | || ||| | | Sbjct 29255 CACGCTCATAGATGATAGCGGAGTCCAGAAGTTCGCGATGTTTCATCACAGTATTGAAAG 29314 Query 63934 TAATACTT--GAAATAATCGGAGAAT-GTTTCCCATTTTTAGGATTAACATAGTTGAATA 63990 | ||| || || || |||| | | ||| |||| ||||| ||||||| | Sbjct 29315 T--CTCTTCAGATATCAT-GGAGCTTGGGCGGCCAGTTTTTGGATTCACATAGTCATGCA 29371 Query 63991 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTA 64050 |||| | || || | ||||| || || || |||||||| ||||| ||||| | Sbjct 29372 AATCTTGAATGACCTGGCTAAAACTCTTCTTGGTCTCCTTGTGAAGATTGCTAATGGCAA 29431 Query 64051 TTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCG 64109 | | || || || | |||||| || || ||| || || | || || || ||||| Sbjct 29432 TCCGCGCTGCCAGTACGGCATAGTCTGGGTGTGTCGTGGT-CTTGTACGCGGCCGTTTCG 29490 Query 64110 GCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTC 64169 ||||||| | | || | || || || || || || | || || || | ||||| || Sbjct 29491 GCTGCCAAATTATCAAGCTCAACGGTCGTGACCCCCTCGTAGATACCATCGATAACTTTT 29550 Query 64170 ATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTT 64222 | | |||| || ||||| | | | | ||| ||||||||||||| ||| Sbjct 29551 CTCGTAATTTCGATGGGATCAACAAAGTTCATGTCCAAGCCATAGCACAGTTT 29603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816513564640