Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq137 98.7 1e-15 seq83 95.1 1e-14 seq107 87.8 2e-12 >seq137 Length=390227 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || ||||| | || | ||| | ||| ||||| ||||||||||| || || ||| Sbjct 280104 CCACCGCGCAAACGAAGCACGAGGTGCAACGTTGACTCCTTTTGAATGTTGTAGTCACTC 280045 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | || ||||| || || ||||| ||||||| || || || || ||||| Sbjct 280044 AGAGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 279985 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| |||| | || | | || | ||||| | | ||||| Sbjct 279984 ATACCCTCCTTGTC-CTGAATTTTCGCCTTGACATTCTCAATCGTGTCCGACGATTCCAC 279926 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGC 139767 ||| | ||| | ||||||||| |||| || || ||||| | |||||| || Sbjct 279925 CTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCATGGC 279875 >seq83 Length=277254 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 52836 AGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGG 52895 ||||||||| || || || | || || || || || || | || || || | | || Sbjct 45550 AGAGGCCGTTGATATCGAGCAGGACTTCTTGACAGATGCGCTCCCTGTCTCGCTCATTGG 45609 Query 52896 CATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCA 52955 ||||| || | |||||||| | ||||| |||||||||||||| | || | || Sbjct 45610 TATGAATGCTAGGCTGATGTGCCAATACATTGAGTTTGTTGCGGATCGCCTTCTTGTGGC 45669 Query 52956 GCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATC 53015 || || | ||||| |||| || || |||||||| |||||| | ||||| || Sbjct 45670 TCTGGGCAACCCGAAGCACTACAACTCGACAAACCCCTTCGACTTTATGGAGAACATTTC 45729 Query 53016 GCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTA 53060 |||| | |||||| | || || || ||| | ||||||||||| || Sbjct 45730 GCTCCAAGGCAAATCGAATTTCTTTGAGCGCCGTGTGGGCGACTA 45774 >seq107 Length=33973 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/145 (74%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||| ||| | || ||||||| || |||||||||||| || || ||||| Sbjct 781 GCCCCCGCGTAGACGTAGCACCAAGTGAAGGGTGCTCTCTTTTTGAATATTGTAGTCGCT 840 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||||| ||||| ||||| || |||| || ||||| ||||| || || Sbjct 841 TAAAGTGCGGCCATCTTCAAGCTGCTTACCGGCGAAGATAAGGCGTTGTTGATCCGGCGG 900 Query 139657 TATGCCTTCTTTGTCGGTGATTTTT 139681 |||||||| ||||| ||| |||| Sbjct 901 AATGCCTTCCTTGTC-CTGAATTTT 924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063144289600