Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq113 95.1 9e-15 seq107 93.3 3e-14 >seq113 Length=631273 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || |||||||| | | ||| | ||| | || ||||| || | |||||| || | Sbjct 468698 CCACCACGCAGGCGAAGCACAAGATGCAGTGTCGATTCCTTCTGGATATTGTAGTCACTC 468639 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || ||||| || |||||||| |||||||| |||||||| |||| || Sbjct 468638 AGCGTACGTCCATCCTCCAACTGCTTGCCGGCGAAAATCAAGCGCTGTTGGTCGGGGGGA 468579 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || ||| | || || || | | |||||| | |||||| Sbjct 468578 ATGCCTTCCTTATCTTGGATTTTGGCCTTTACGTTGTCGATCGTGTCGGATGACTCGACC 468519 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | ||| || ||||| ||||| | || || || ||||||||||| Sbjct 468518 TCAAGCGTGATTGTTTTGCCGGTCAATGTCTTGACGAAAATTTGCAT 468472 >seq107 Length=33973 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 42881 CGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGG 42940 |||| || || || | || |||||| || | |||||||| ||||| | |||||| ||| Sbjct 780 CGCCCCCGCGTAGACGTAGCACCAAGTGAAGGGTGCTCTCTTTTTGAATATTGTAGTCGC 839 Query 42941 ACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCG 43000 || || || | || || | || || ||||| || || | || |||||||| | || Sbjct 840 TTAAAGTGCGGCCATCTTCAAGCTGCTTACCGGCGAAGATAAGGCGTTGTTGATCCGGCG 899 Query 43001 GCACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCG 43059 | | ||||| || || |||| | | ||||| || | | || |||| | ||| Sbjct 900 GAATGCCTTCCTTGTC-CTGAATTTTGGCCTTGACGTTGTCGATGGTATCGCTACTTTCG 958 Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | ||| || || ||||| || || |||||||||||||| ||||| Sbjct 959 ACTTCGAGCGTGATGGTCTTTCCAGTGAGGGTTTTCACAAAAATCTGCAT 1008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381368958584004