Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq83 145 1e-29 >seq83 Length=277254 Score = 145 bits (160), Expect = 1e-29 Identities = 646/1001 (65%), Gaps = 24/1001 (2%) Strand=Plus/Plus Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 |||||||| | ||||| ||| ||| | | || || ||||| || || || || | | Sbjct 28615 GGACACATAAGAGACCAATCTTCATTCTTCTCGACACGCTTCATGAAAAGGTCTGGCACC 28674 Query 72049 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTA--- 72105 || | || | || | ||| | | | | ||| || ||||| || |||||| Sbjct 28675 CACATGGCCAGGAACAAATCGCGTGCGCGAACCTCGTCCTTTCC---ATGGTTTTTACGA 28731 Query 72106 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCC 72165 ||||| | ||| | | | ||||| ||||| || |||| ||| ||||| | | || Sbjct 28732 AGATCCACGAATTCAAATACATCAGGGTGCCATGGCTCCAGGTAAATGGCAAACGCACCT 28791 Query 72166 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 72225 || || || || || ||||| || | ||| | ||| ||||| ||| |||||| | ||| Sbjct 28792 GGTCGCTTATTGCCGCCCTGGTCGACGTAACGAGCCGTGTTGTTAAAAACTCGAAGCATG 28851 Query 72226 GGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA 72285 || | || |||||| | | ||||| || || | || || || | | || ||| Sbjct 28852 GGCACGATTCCATTGCTTACTCCATTAGTGCCAGCAATGTACGAGCCTGTACCTCGGATA 28911 Query 72286 TTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 72345 ||| || |||||| || || || ||| | || || | || || ||| || | Sbjct 28912 TTGTGGATGTTTAGACCGATGCCACCAGCCGTCTTGCTTATCATGGCACA-CGTCTTGAG 28970 Query 72346 -GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACAT 72404 || || || |||||||| ||| || || |||| | || || || ||||| Sbjct 28971 AGTGTCGTAAATGCCCTCAATAGAGTCTTCTTTCATAGACACTAAGAAGCACGACGACAT 29030 Query 72405 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 72464 ||| || | || || |||||||||| || || || || || || || ||||| Sbjct 29031 TTGCGGATTAGGCGTGCCAGCATTAAATAGAGTCGGCGATGCATGTGTGAATGCCTTTTC 29090 Query 72465 AGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTGATGTATTCCTACC 72522 ||||| |||| ||||| |||||||| || ||| || || || | || ||||| || Sbjct 29091 AGACATGTAG-TTGTATGTCTCAATGGCACTTTCAATGTCTTCACCG-TGAATTCCAACA 29148 Query 72523 GCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAG 72582 ||||||||||| | ||| |||||||| | ||| | | || ||| || ||| | | Sbjct 29149 GCGACACGCATGAGCATGTGCTGAGGCCGTTCGGCAACTTTACCATTAATGCGCAAGAGG 29208 Query 72583 TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGTTCGTAAAT 72641 || || ||| | |||||| || ||||| ||||||| || ||| || || || || || Sbjct 29209 TAAGAGCGTTCTAGAGTTTTGAAGCCAAAGAAGTTGTAGTGGAAA-TCACGCTCATAGAT 29267 Query 72642 AATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT--GAA 72699 ||| | || | || || || ||| | || ||| | || ||| || Sbjct 29268 GATAGCGGAGTCCAGAAGTTCGCGATGTTTCATCACAGTATTGAAAGT--CTCTTCAGAT 29325 Query 72700 ATAATCGGAGAAT-GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCAC 72758 || || |||| | | ||| |||| ||||| ||||||| ||||| | || || Sbjct 29326 ATCAT-GGAGCTTGGGCGGCCAGTTTTTGGATTCACATAGTCATGCAAATCTTGAATGAC 29384 Query 72759 TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAG 72818 | ||||| || || || |||||||| ||||| | ||| || | || || || Sbjct 29385 CTGGCTAAAACTCTTCTTGGTCTCCTTGTGAAGATTGCTAATGGCAATCCGCGCTGCCAG 29444 Query 72819 AATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGT 72877 | |||||| ||||| ||| || || | || || || |||| ||||||| | | | Sbjct 29445 TACGGCATAGTCTGGGTGTGTCGTGGT-CTTGTACGCGGCCGTTTCGGCTGCCAAATTAT 29503 Query 72878 CCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAA 72937 | | || || || || || || | || || || | |||||| || | | |||| | Sbjct 29504 CAAGCTCAACGGTCGTGACCCCCTCGTAGATACCATCGATAACTTTTCTCGTAATTTCGA 29563 Query 72938 TAGGATCTA-TATGATCAGTGTTTAAGCCATAACATAATTT 72977 | ||||| | | | ||| ||| |||||||| || | ||| Sbjct 29564 TGGGATCAACAAAGTTCA-TGTCCAAGCCATAGCACAGTTT 29603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138042284880