Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq83 163 4e-35 >seq83 Length=277254 Score = 163 bits (180), Expect = 4e-35 Identities = 387/581 (67%), Gaps = 8/581 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 ||||| || ||| || || || ||||| | | ||| || || ||||| |||| || Sbjct 45489 CATGCAAAGTCGGTATGAAGGCCTTCGTCGCGAGAAATGAGCTCATTGGAGAACGACAGA 45430 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| |||||||| || || ||||| || |||||||||||||| || || || ||| Sbjct 45429 CCAGGCATGAGGCCACGTTTCTTGAGCCAGAAGATGGAAGCGAATGAGCCCGAGAAAAAG 45370 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGC---GCTGTCATG 33479 || || || || ||||||||||||| ||| | |||| | ||| ||| | ||| Sbjct 45369 ATGCCCTCGACAGCAGCAAAGGCAACAAGGCGCTCT-GAGAACGAGGCACGGTGGTCCGA 45311 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 ||||| | ||||||| || ||||||| || || |||| || || || ||||| Sbjct 45310 GATCCAACGTAGAGCCCAGTCAGCCTTCTGCTTCACGACTGGCACTGTCTCAATAGCATT 45251 Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599 || | | ||| | | || || || || || || | ||| || | Sbjct 45250 GAACAAAAAGTCGCGGCGTTCAGGCTCGCGAATGTACGTGTCAATAAGAAGCGAGTAGGT 45191 Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659 ||| || || |||||||| || ||||| || || ||||| || | ||||| || Sbjct 45190 TTCAGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAGAAGCAACGTGCCTCAGTGGC 45131 Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719 ||| ||||| | | || || || ||| ||| || || || || || || ||||| Sbjct 45130 CTGGACTTCGGCGCTGAACCGCTCGACCAGATTCTCGTTGACAATACCATCTGATGCTGC 45071 Query 33720 AAAAAACGCCAATACATGTTTTATAAAATATTTTTC---GTCTGGTGTTAGTTTATTCCA 33776 ||| ||||| | |||||| | | || | || ||| | | | || | ||| Sbjct 45070 AAAGAACGCAAGTACATGGCTCACGAAGTGACGCTCGGGGTCCGTCATCCGATTGTCCCA 45011 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 || | | || || || | || | ||| || | |||||||||||||| |||||||| Sbjct 45010 GTCGTACAGGTCCTTGGACAAGTCAATTTCCTCGGCCGTCCAAAATGATGCTTCTGCCTT 44951 Query 33837 TTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAA 33877 || ||||| | |||||| |||| || |||||||||||| Sbjct 44950 CTTGTACATTTGCCAGATTTCATGGTAACGGATTGGGAAAA 44910 Score = 125 bits (138), Expect = 9e-24 Identities = 646/1010 (64%), Gaps = 28/1010 (3%) Strand=Plus/Plus Query 63176 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAG 63232 |||| | |||||||| | ||||| ||| |||| |||| || || ||||| || || Sbjct 28608 TTCAGCTGGACACATAAGAGACCAATCT---TCATTCTTCTCGACACGCTTCATGAAAAG 28664 Query 63233 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 63292 || || | ||| | || | || | ||| | | | | || || ||||| || Sbjct 28665 GTCTGGCACCCACATGGCCAGGAACAAATCGCGTGCGCGAACCTCGTCCTTTCC---ATG 28721 Query 63293 CTTTTTA---AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63349 |||||| ||||| | ||| | | | ||||| ||||| || |||| ||| ||||| Sbjct 28722 GTTTTTACGAAGATCCACGAATTCAAATACATCAGGGTGCCATGGCTCCAGGTAAATGGC 28781 Query 63350 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63409 | | || || || || || || ||||| || | ||| | ||| ||||| ||| |||| Sbjct 28782 AAACGCACCTGGTCGCTTATTGCCGCCCTGGTCGACGTAACGAGCCGTGTTGTTAAAAAC 28841 Query 63410 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACT 63469 || | ||| || | || || || || ||||| || || | || || || | Sbjct 28842 TCGAAGCATGGGCACGATTCCATTGCTTACTCCATTAGTGCCAGCAATGTACGAGCCTGT 28901 Query 63470 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63529 | || ||||| || |||||| || || || ||| | || || | || || Sbjct 28902 ACCTCGGATATTGTGGATGTTTAGACCGATGCCACCAGCCGTCTTGCTTATCATGGCACA 28961 Query 63530 TCGTTTTAAC-GTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAAC 63588 ||| || | ||||| || || ||||| || || || |||| | || || | Sbjct 28962 -CGTCTTGAGAGTGTCGTAAATGCCCTCAATAGAGTCTTCTTTCATAGACACTAAGAAGC 29020 Query 63589 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 63648 | |||||||| || | || || |||||||||| || || || || || || | Sbjct 29021 ACGACGACATTTGCGGATTAGGCGTGCCAGCATTAAATAGAGTCGGCGATGCATGTGTGA 29080 Query 63649 ACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATG 63706 | |||||||| | |||| ||||| |||||||| || || || || || | || Sbjct 29081 ATGCCTTTTCAGACATGTAG-TTGTATGTCTCAATGGCACTTTCAATGTCTTCACCG-TG 29138 Query 63707 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63766 |||||| || ||||||||||| | |||||||||||| | ||| | | || || || Sbjct 29139 AATTCCAACAGCGACACGCATGAGCATGTGCTGAGGCCGTTCGGCAACTTTACCATTAAT 29198 Query 63767 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTC 63825 ||| | ||| || ||| | |||||| || ||||| ||||||| || ||| || | Sbjct 29199 GCGCAAGAGGTAAGAGCGTTCTAGAGTTTTGAAGCCAAAGAAGTTGTAGTGGAAA-TCAC 29257 Query 63826 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGA 63885 | || || || ||| | |||| || || || ||| | || ||| | || Sbjct 29258 GCTCATAGATGATAGCGGAGTCCAGAAGTTCGCGATGTTTCATCACAGTATTGAAAGT-- 29315 Query 63886 TACTT--GAAATAATCGGAGAAT-GTTTCCCATTTTTAGGATTAACATAGTTGAATAAAT 63942 ||| || || || |||| | | ||| |||| ||||| ||||||| |||| Sbjct 29316 CTCTTCAGATATCAT-GGAGCTTGGGCGGCCAGTTTTTGGATTCACATAGTCATGCAAAT 29374 Query 63943 CCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTC 64002 | | || || | ||||| || || || |||||||| ||||| | ||| || | Sbjct 29375 CTTGAATGACCTGGCTAAAACTCTTCTTGGTCTCCTTGTGAAGATTGCTAATGGCAATCC 29434 Query 64003 TGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCT 64061 || || || | |||||| || || ||| || || | || || || |||||||| Sbjct 29435 GCGCTGCCAGTACGGCATAGTCTGGGTGTGTCGTGGT-CTTGTACGCGGCCGTTTCGGCT 29493 Query 64062 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATA 64121 |||| | | || | || || || || || || | || || || | ||||| || | Sbjct 29494 GCCAAATTATCAAGCTCAACGGTCGTGACCCCCTCGTAGATACCATCGATAACTTTTCTC 29553 Query 64122 GCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACATAATTT 64171 | |||| || ||||| | | | | ||| |||||||| || | ||| Sbjct 29554 GTAATTTCGATGGGATCAACAAAGTTCATGTCCAAGCCATAGCACAGTTT 29603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946125416080