Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq83 239 1e-57 >seq83 Length=277254 Score = 239 bits (264), Expect = 1e-57 Identities = 728/1106 (66%), Gaps = 42/1106 (4%) Strand=Plus/Minus Query 363415 TCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGT 363474 || ||||| | || || |||||| | ||| ||||| || ||||| ||| | |||||| Sbjct 29213 TCTTACCTCTTGCGCATTAATGGTAAAGTTGCCGAACGGCCTCAGCACATGCTCATGCGT 29154 Query 363475 GTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTC-T 363533 || ||| |||| || || | || |||| || ||||| ||||| || || | | Sbjct 29153 GTCGCTGTTGGAATTCACGGTGAAGACATTGAAAGTGCCATTGAGACATACAA-CTACAT 29095 Query 363534 AAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCC 363593 || | |||||| || || |||| || | | |||||||| || | |||||| Sbjct 29094 GTCTGAAAAGGCATTCACACATGCATCGCCGACTCTATTTAATGCTGGCACGCCTAATCC 29035 Query 363594 ACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGA 363653 || ||||| || ||||| | | ||||| || || || || ||||| || | || Sbjct 29034 GCAAATGTCGTCGTGCTTCTTAGTGTCTATGAAAGAAGACTCTATTGAGGGCATTTACGA 28975 Query 363654 CACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCA 363713 ||| || |||| ||||| | || ||||| || || || || ||| || ||||| Sbjct 28974 CACTCTCAAGACGTGTGCCATGATAAGCAAGACGGCTGGTGGCATCGGTCTAAACATCCA 28915 Query 363714 CAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGGA-TACTCGAATGGGCTG 363771 |||| | || | |||| || ||||| ||||| ||| || | ||||| | Sbjct 28914 CAATATCCGAGGTACAGGCTCGT-ACATTGCTGGCACTAATGGAGTAAGC-AATGGAATC 28857 Query 363772 GTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831 || ||||||||||| || ||| |||| || || | |||||||||||||| || ||| Sbjct 28856 GTGCCCATGCTTCGAGTTTTTAACAACACGGCTCGTTACGTCGACCAGGGCGGCAATAAG 28797 Query 363832 CGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTT 363891 || ||| |||||||| || || || ||||| || | ||| | ||||| || | Sbjct 28796 CGACCAGGTGCGTTTGCCATTTACCTGGAGCCATGGCACCCTGATGTATTTGAATTCGTG 28737 Query 363892 GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTT 363951 || || || |||||| ||||| || || | || ||||| ||| ||||| || | Sbjct 28736 GATCTTCGTAAAAACCATGGAAAGGACGAGGTTCGCGCACGCGATTTGTTCCTGGCCATG 28677 Query 363952 TGGGTTTCTGACCATTTTATGAAGCGCGTGGAG--GCAGGTAAGAATTGGTCACTCTTTT 364009 ||||| | |||| ||| |||||||| || ||| | | | ||| ||||||| || | | Sbjct 28676 TGGGTGCCAGACCTTTTCATGAAGCGTGTCGAGAAGAATG-AAG-ATTGGTCTCTTATGT 28619 Query 364010 GCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACG 364069 | ||| ||| ||||||||| | ||| | || || || | | | || || | Sbjct 28618 GTCCAGCTGAAGCACCAGGTCTTGCTGATTGCTACGGCGAGGAGTTCGAAGAGCTTTATG 28559 Query 364070 AAAAGTATGAATCGGAGGGAAAGGCTCGT--AAGACAATTC----CCGCACAGAAGCTAT 364123 || ||| ||| | ||| |||| || || || | || |||||||| | Sbjct 28558 AACGTTAT------GAGCGTGAGGGTCGTGCAAAACGATCCGTCAAGGCCCAGAAGCTGT 28505 Query 364124 GGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATT 364183 ||| |||||| |||| | || || ||||| || | || | ||||| ||||||||| Sbjct 28504 GGTATGCCATTCTGGAGGCTCAAATAGAGACGGGCAATCCGTTCATGTTATACAAAGATG 28445 Query 364184 CGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAG---CAACCTAT 364240 || ||||||||| || ||| | |||| || || | ||| |||| |||||| | Sbjct 28444 CGGCCAACCGCAAAAGTAATCAGAAAAACCTCGGCACGA-TCA--AGAGCTCCAACCTCT 28388 Query 364241 GTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGA 364300 ||||||| ||||| ||||||| | || || ||||| || || |||||||| || || | Sbjct 28387 GTACCGAAATTATCGAATACAGTTCGCCAGAGGAGACGGCAGTGTGTAACCTAGCCTCTA 28328 Query 364301 TCGCGCTTCCGGCGTTTGTAAAAG---ATGGTACTTTTGACCACCAGCATCTTTATGACG 364357 | || || || | ||| | ||| ||| | | || | || ||| | | Sbjct 28327 TTGCACTGCCCACATTTATTGAAGGAACTGGCGC-CTCGAAAATATACAACTTCCAGCGG 28269 Query 364358 TAAC-CTATCATGCTA----CTTG-----CAATCTCGACAAGGTTATCGACAAGAATTAT 364407 | | | || ||||| | || |||||| | | | ||||| | || || Sbjct 28268 TTGCACGATGTTGCTAAAGTCGTGTGCAAGAATCTCAATCGGATCATCGATATCAACTAC 28209 Query 364408 TATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTA 364467 || ||| ||||| ||| ||| || |||||||| || || || ||||| |||||||| Sbjct 28208 TACCCAGTTCCTAGCGCCCGGCGCTCAAATATGCGCCACCGTCCCATTGGAATTGGTGTA 28149 Query 364468 CAGGGCCTCGCTGACGTTTTTATGAT 364493 ||||| || ||||| | || ||||| Sbjct 28148 CAGGGTCTGGCTGATGCATTCATGAT 28123 Score = 93.3 bits (102), Expect = 1e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 22480 TCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA 22539 || ||| | || || ||| |||| ||||||| || || ||||| || || || || || Sbjct 45326 TCGTTCTCAGAGCGCCTTGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCGGGCTCA 45385 Query 22540 TTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAAT 22599 || | | ||||| ||||| || ||||||| | ||||| ||||| |||| || ||| Sbjct 45386 TTCGCTTCCATCTTCTGGCTCAAGAAACGTGGCCTCATGCCTGGTCTGTCGTTCTCCAAT 45445 Query 22600 GAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 ||| | ||| || || || || ||||||||||| ||||| || Sbjct 45446 GAGCTCATTTCTCGCGACGAAGGCCTTCATACCGACTTTGCATG 45489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351295507916