Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq107 134 9e-27 seq74 127 1e-24 seq2 104 2e-17 seq137 84.2 1e-11 >seq107 Length=33973 Score = 134 bits (148), Expect = 9e-27 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| | |||||| ||||| |||||||| |||||||||||||| || ||| || | Sbjct 793 ACGTAGCACCAAGTGAAGGGTGCTCTCTTTTTGAATATTGTAGTCGCTTAAAGTGCGGCC 852 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || | || || ||||| || || |||||||||||||| | || | |||||| || Sbjct 853 ATCTTCAAGCTGCTTACCGGCGAAGATAAGGCGTTGTTGATCCGGCGGAATGCCTTCCTT 912 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 |||| |||||| ||| || || | || ||||| | |||||| ||||| | || || Sbjct 913 GTCCTGAATTTTGGCCTTGACGTTGTCGATGGTATCGCTACTTTCGACTTCGAGCGTGAT 972 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || | ||||||||| || ||||||||| Sbjct 973 GGTCTTTCCAGTGAGGGTTTTCACAAAAATCTGCATG 1009 >seq74 Length=3226 Score = 127 bits (140), Expect = 1e-24 Identities = 84/93 (90%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || ||||||||| Sbjct 2426 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTC 2367 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 2366 ATCCATTCATGCGCGTCACTAATTAGATGACGA 2334 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 429 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 370 Query 20007 GGTAATATTTAGCCTTA 20023 ||||||||| ||| Sbjct 369 CCCGATATTTAGCTTTA 353 >seq2 Length=254 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 87 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 146 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 147 GCCAATATTTAGCTTTA 163 >seq137 Length=390227 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | |||||| | ||| | || | || |||||||||||| ||||| ||| Sbjct 280105 ACCACCGCGCAAACGAAGCACGAGGTGCAACGTTGACTCCTTTTGAATGTTGTAGTCACT 280046 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || | ||| | || || | ||| || || || || || ||||| ||||| || | || Sbjct 280045 CAGAGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGAGG 279986 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCAA 38268 | || || |||||| |||||| ||| ||||||| | || || | || ||| | Sbjct 279985 AATACCCTCCTTGTCCTGAATTTTCGCCTTGACATTCTCAATCGTGTC-CGACGATTCCA 279927 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || | || || || || ||||||| ||| || ||||| | |||||| Sbjct 279926 CCTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAACACTTGCATG 279877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946636660678