Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq113 131 1e-25 seq137 111 1e-19 seq107 107 2e-18 seq86 102 7e-17 >seq113 Length=631273 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || |||||||| || || ||||| |||||||| ||| | ||||| | || || ||||| Sbjct 468469 ACCATGCAAATTTTCGTCAAGACATTGACCGGCAAAACAATCACGCTTGAGGTCGAGTCA 468528 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| ||||| | ||| |||||| || || ||||| ||||| || ||| Sbjct 468529 TCCGACACGATCGACAACGTAAAGGCCAAAATCCAAGATAAGGAAGGCATTCCCCCCGAC 468588 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | ||||| |||||||| || || || |||| || || || | || ||| Sbjct 468589 CAACAGCGCTTGATTTTCGCCGGCAAGCAGTTGGAGGATGGACGTACGCTGAGTGACTAC 468648 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || ||||| || || ||| | ||||| Sbjct 468649 AATATCCAGAAGGAATCGACACTGCATCTTGTGCT 468683 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||||| ||| | ||||| | || || ||||| || Sbjct 468700 ATGCAGATTTTCGTCAAGACACTGACCGGCAAAACAATCACGCTTGAGGTCGAGTCATCC 468759 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| |||||| || || ||||| ||||| || |||||| Sbjct 468760 GACACGATCGACAACGTAAAGGCCAAAATCCAAGATAAGGAAGGCATTCCCCCCGACCAA 468819 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| ||||| || || || || |||| || || || | || |||||| Sbjct 468820 CAGCGCTTGATTTTCGCCGGTAAGCAGTTGGAGGATGGACGTACGCTGAGTGACTACAAT 468879 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || ||||| || || ||| | ||||| Sbjct 468880 ATCCAGAAGGAATCGACACTGCATCTTGTGCT 468911 >seq137 Length=390227 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| |||| || || | ||||| |||| ||||| ||||| Sbjct 279878 ATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCG 279937 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| | ||| | |||| ||| ||||| || || ||||| || ||||| Sbjct 279938 GACACGATTGAGAATGTCAAGGCGAAAATTCAG-GACAAGGAGGGTATTCCTCCGGACCA 279996 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || ||||| ||| | || |||| || ||| || | || ||||| Sbjct 279997 ACAGCGCCTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACTCTGAGTGACTACAA 280056 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| || || ||| | || | ||||| Sbjct 280057 CATTCAAAAGGAGTCAACGTTGCACCTCGTGCT 280089 >seq107 Length=33973 Score = 107 bits (118), Expect = 2e-18 Identities = 166/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGA--GTCGT 25056 ||||| || ||||| || || | || || || ||||||| ||||||| || || | Sbjct 1008 ATGCAGATTTTTGTGAAAACCCTCACTGGAAAGACCATCACGCTCGAAGTCGAAAGTAGC 949 Query 25057 CTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 || || ||||| |||| | || |||| ||| ||||| ||||| ||||| || Sbjct 948 --GATACCATCGACAACGTCA---AGGCCAAAATTCAG-GACAAGGAAGGCATTCCGCCG 895 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 || ||||| || |||| || ||||| || || | ||||||| |||||| | |||| Sbjct 894 GATCAACAACGCCTTATCTTCGCCGGTAAGCAGCTTGAAGATGGCCGCACTTTAAGCGAC 835 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||||||||| ||| || || || |||||| | ||| | || || Sbjct 834 TACAATATTCAAAAAGAGAGCACCCTTCACTTGGTGCTACGTCTACGCGGGGG 782 >seq86 Length=214995 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| || || | ||||| |||| || ||||| || Sbjct 125546 ATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 125605 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || ||||| | || | ||| ||||| || || ||||| || ||||| Sbjct 125606 GACACGATTGACAATGTGAAGGCCAAGATTCAA-GACAAGGAGGGCATTCCTCCGGACCA 125664 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || || || || | ||||| | ||||||| || | || ||||| Sbjct 125665 ACAGCGTCTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGAGTGACTACAA 125724 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 125725 CATCCAGAAGGAGTCGACCCTTCACCTGGTGCT 125757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327271196470