Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq107 134 1e-26 seq137 105 6e-18 seq113 100 2e-16 seq86 87.8 2e-12 seq83 86.0 5e-12 >seq107 Length=33973 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| | || || || || |||| || ||||| |||| | | Sbjct 1008 ATGCAGATTTTTGTGAAAACCCTCACTGGAAAGACCATCACGCTCGAAGTCGAAAGTAGC 949 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| |||||||| |||||||| || ||||| || |||||| Sbjct 948 GATACCATCGACAACGTCAAGGCCAAAATTCAGGACAAGGAAGGCATTCCGCCGGATCAA 889 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| ||||| || ||||| || ||| | || ||| |||||| | ||| ||||| Sbjct 888 CAACGCCTTATCTTCGCCGGTAAGCAGCTTGAAGATGGCCGCACTTTAAGCGACTACAAT 829 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||||||||| |||| | || || || | || | ||||| || Sbjct 828 ATTCAAAAAGAGAGCACCCTTCACTTGGTGCTACGTCTACGCGGGGG 782 >seq137 Length=390227 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | || || || ||| |||| || || |||||| | | Sbjct 279878 ATGCAAGTGTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCG 279937 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| |||||||| ||||||||||||||||| || || ||| Sbjct 279938 GACACGATTGAGAATGTCAAGGCGAAAATTCAGGACAAGGAGGGTATTCCTCCGGACCAA 279997 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| || | |||||| ||| || | || |||||| Sbjct 279998 CAGCGCCTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACTCTGAGTGACTACAAC 280057 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || || || | || | || | || |||||||| ||| Sbjct 280058 ATTCAAAAGGAGTCAACGTTGCACCTCGTGCTTCGTTTGCGCGGTGGT 280105 >seq113 Length=631273 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || || ||||| ||||| |||| ||||| || || | || Sbjct 468472 ATGCAAATTTTCGTCAAGACATTGACCGGCAAAACAATCACGCTTGAGGTCGAGTCATCC 468531 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 468532 GACACGATCGACAACGTAAAGGCCAAAATCCAAGATAAGGAAGGCATTCCCCCCGACCAA 468591 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||| ||||| |||||| || || | || ||||| Sbjct 468592 CAGCGCTTGATTTTCGCCGGCAAGCAGTTGGAGGATGGACGTACGCTGAGTGACTACAAT 468651 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || ||||| || | ||| | || | || |||| || ||| Sbjct 468652 ATCCAGAAGGAATCGACACTGCATCTTGTGCTTCGCCTGCGTGGTGGT 468699 >seq86 Length=214995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || || || || ||| |||| || || || || || | Sbjct 125546 ATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 125605 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||||||||||||||| ||||| || || ||| Sbjct 125606 GACACGATTGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGCATTCCTCCGGACCAA 125665 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | || || ||||| | || |||||| Sbjct 125666 CAGCGTCTGATCTTCGCTGGTAAGCAGCTTGAAGACGGTCGCACTCTGAGTGACTACAAC 125725 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 125726 ATCCAGAAGGAGTCGACC 125743 >seq83 Length=277254 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 117277 TCATAGAGGCGGTGGACATTGAAAAGGAATTTTTTACAACAGCTCTACCCTGT-TATTTG 117335 ||| |||||| || || || || |||| || || ||| || || |||||| | | Sbjct 45546 TCACAGAGGCCGTTGATATCGAGCAGGACTTCTTGACAGATGCGCT-CCCTGTCTCGCTC 45604 Query 117336 CTGGGAATAAATGCCACGGAAATGTGTAAATACATTGAATTTGTCGCGGACAGGTTATTA 117395 | || || ||||| | | ||||| |||||||||| ||||| ||||| | | | Sbjct 45605 ATTGGTATGAATGCTAGGCTGATGTGCCAATACATTGAGTTTGTTGCGGATCGCCTTCTT 45664 Query 117396 GTGGAATTGCGACAACCGAAACATTTTAATACGCCGAATCCGTTCAATTTTATGACAAAC 117455 |||| || | | ||||| || | || || | || || ||| | |||||| ||| Sbjct 45665 GTGGCTCTGGGCAACCCGAAGCACTACAACTCGACAAACCCCTTCGACTTTATGGAGAAC 45724 Query 117456 ATTTCGCTGGAAGGCAAGACAAAtttttttGAGCGTCGCGTAGGCGAATAT 117506 |||||||| ||||||| | ||||| |||||||| || || ||||| ||| Sbjct 45725 ATTTCGCTCCAAGGCAAATCGAATTTCTTTGAGCGCCGTGTGGGCGACTAT 45775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727294069970