Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq83 123 5e-23 seq81 95.1 2e-14 seq103 91.5 3e-13 >seq83 Length=277254 Score = 123 bits (136), Expect = 5e-23 Identities = 298/444 (67%), Gaps = 8/444 (2%) Strand=Plus/Minus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 |||||||| || |||||||| || ||||| | || || || |||||| ||||||||| Sbjct 45765 ACACGGCGCTCAAAGAAATTCGATTTGCCTTGGAGCGAAATGTTCTCCATAAAGTCGAAG 45706 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 |||||||| | ||||| ||||| || | ||| || || || | | ||| || || ||| Sbjct 45705 GGGTTTGTCGAGTTGTAGTGCTTCGGGTTGCCCAGAGCCACAAGAAGGCGATCCGCAACA 45646 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | || || | |||||| || ||||| ||||| | ||| | ||| | || Sbjct 45645 AACTCAATGTATTGGCACATCAGCCTAGCATTCATACCAATGA-GCGAGACAGGGAGCGC 45587 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 || | ||| |||| ||| | |||| ||||| | || ||| | | ||| Sbjct 45586 ATCTGTCAAGAAGTCCTGCTCGATATCAACGGCCTCTGTGATAA-TGCGGTTTACAGTGT 45528 Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGG--TGCAG 251849 | | | || | |||| || | | ||| ||| |||| || || || || Sbjct 45527 CGGGGTGTGCACGCTTCTTCAAGTGGCTGAACAAGAGGCATGCAAA--GTCGGTATGAAG 45470 Query 251850 ACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTT 251909 || ||||||||| |||| ||| ||||| | ||| |||||||| | ||||| || Sbjct 45469 GCCTTCGTCGCGAGAAATGAGCTCATTGGAGAACGACAGACCAGGCATGAGGCCACGTTT 45410 Query 251910 CCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCA 251969 | ||||||||||||| | || || || ||||| | | ||||||||| | | Sbjct 45409 CTTGAGCCAGAAGATGGAAGCGAATGAGCCCGAGAAAAAGATGCCCTCGACAGCAGCAAA 45350 Query 251970 TGCAACAAGGCGCTCAGCAAACGA 251993 |||||||||||||| | ||||| Sbjct 45349 GGCAACAAGGCGCTCTGAGAACGA 45326 Score = 91.5 bits (100), Expect = 3e-13 Identities = 178/259 (69%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 293128 ACAAAGGCACCACGATCAGCAGCGAGGTCA---ATCACTGTCTTCATAGAGATCTCCCAC 293184 |||||||| |||||||||||||| | ||| |||||| ||| | ||| |||||| Sbjct 27559 ACAAAGGCGCCACGATCAGCAGCCATATCAATGATCACT---TTCTGACTGATTTCCCAC 27615 Query 293185 GATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGACCCT 293244 |||||||||| ||||| | | |||||||| || |||||||| ||||| Sbjct 27616 ACGGTCTTGTACAGGGCCTTAATGTGGTCGGGAATGCCAGGTACATTCTGGATCGACCCG 27675 Query 293245 CCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACC-AAGTCCCACGAGCAATGAGCTC 293303 || | ||||| || | | |||||| | || || ||| |||| | | | |||||| Sbjct 27676 CCATGTGCAATGATTTTCTGCTTCATCGAATCATTCCAAAGACCCA-GTTCCACGAGCTC 27734 Query 293304 GCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAAT 293363 || | || | | |||||| || ||||||| |||||||| || || ||||||| Sbjct 27735 CCGCAAGAGCCACGGGTTGACGACTTGGAACTCGCCAGCGAGGACACGTCGCATGTAAAT 27794 Query 293364 GTTCGAAGTGATGGGTTCG 293382 ||| |||| |||||| Sbjct 27795 GTTGTTAGTGTATGGTTCG 27813 >seq81 Length=1232180 Score = 95.1 bits (104), Expect = 2e-14 Identities = 346/531 (65%), Gaps = 17/531 (3%) Strand=Plus/Minus Query 218486 TGGACCAGTCGAAG-ACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTT 218544 ||||||| ||||| | ||||| || || | ||||| ||| |||||||| | || | Sbjct 591922 TGGACCA-TCGAATCAGAAACATACCGATCTCGGACTTTATCAACAAGGAGTTGATCTTA 591864 Query 218545 TTCTC----GCGGTATGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCC 218600 ||||| || | | || | || || || || || || || ||||| |||||||| Sbjct 591863 TTCTCAATGGCAG-ACAATATC---CGCTCCATCCCTAGTGTTGTCGATGGACTCAAGCC 591808 Query 218601 ATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGT 218660 | ||||| ||| | ||||| || ||||| || || |||||| ||||| Sbjct 591807 AGGACAGCGGAAGGTGATCTTTAGTTGTTTTAAGCGTAAACTCAAGACAGAAATCAAGGT 591748 Query 218661 CGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCT 218720 | ||| | || ||||| ||||| ||| | || ||||| || || ||| ||| Sbjct 591747 CCATCAACTCCAGGGCTATGTGTCCGAGCATTCGGCGTATCATCATGGCGACCAGGCTCT 591688 Query 218721 GCAGGGTGCC-ATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGC 218779 | | || | || || || | || || |||| | ||||||||||| |||| |||| Sbjct 591687 G-ACCATGACGATCGTCGGTCTCGCGCAAGACTTTTGCGGCAGTAACAATGTGAATTTGC 591629 Query 218780 TGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCA 218839 || | || ||||| || ||||| ||||| ||||||| || ||| || ||| Sbjct 591628 TGATGCCGAACGGACAATTTGGCTCTCGAAGCATGGGTGGCAAAGATGCAGCCAGTGCTC 591569 Query 218840 GGTATATCTTTACAAAGTTGTCGCCCG--TGACGCGCCAGGTGTTCAATCAGGCCGATGA 218897 | || ||||| || || ||| | || | ||||| | ||||| | || |||||| Sbjct 591568 GTTACATCTT--CACAGCTGTACCACGGATCACGCGTCTCATGTTCCACGCGGACGATGA 591511 Query 218898 TGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCC 218957 | || || ||||| ||||| || || || ||||| || ||||||| ||| Sbjct 591510 ACCATTGCTGAACTATCTCGAGGATGACGGACAGAGCATCGAGCCAGAATGGTATGCGCC 591451 Query 218958 TGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGGTT 219008 || | || |||| | ||||| || | |||||||| || ||||| Sbjct 591450 TGTAGTCCCACAGGTGCTGCTGAATGGGGCGGAAGGTATCGGTAC-GGGTT 591401 >seq103 Length=725296 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 |||||| |||||||||||||||| ||||| ||| || ||||| || ||||| || || Sbjct 423392 GGTGTCGTTGGACCCAATGGTGCAGGTAAAAGTACACTCATCAAGGTGCTGACGGGAGAA 423451 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 | | ||| |||||| || || || || ||| |||| |||| | ||| Sbjct 423452 ATTGTGCCCAATGAGGGCAAGGTCGAAAAACACCCTAACCTGCGTGTGGCAATGATGGCT 423511 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 || ||||| |||||||| | ||| | ||| |||| | |||| | ||||||||||| Sbjct 423512 CAACACGCATTCCACCATCTGGAGCAGCACTTGGAGAAGACTGCCTGCCAATACATTCGC 423571 Query 280350 TGGCGCTA 280357 ||||| || Sbjct 423572 TGGCGGTA 423579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834982656058