Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq113 134 1e-26 seq83 89.7 5e-13 seq107 87.8 2e-12 >seq113 Length=631273 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || ||||| || | | ||| |||||||| || |||||||| |||||||| || || || Sbjct 468926 CCGCCGCGCAGGCGAAGCACAAGATGCAGTGTCGATTCCTTCTGGATATTGTAGTCACTC 468867 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || ||| ||||| || || || ||| | ||||| || || ||||| || ||| Sbjct 468866 AGCGTACGTCCATCCTCCAACTGCTTACCGGCGAAAATCAAGCGCTGTTGGTCGGGGGGA 468807 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 |||||||| |||||||| ||||| || | || | || | |||||||| |||||||| Sbjct 468806 ATGCCTTCCTTATCTTGGATTTTGGCCTTTA-CGTTGTCGATCGTGTCGGATGACTCGAC 468748 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | ||||||||||| || || || || ||||| ||||| Sbjct 468747 CTCAAGCGTGATTGTTTTGCCGGTCAGTGTCTTGACGAAAATCTGCAT 468700 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| |||||||| || |||||||| |||||||| || || || | || ||| || Sbjct 468681 CACAAGATGCAGTGTCGATTCCTTCTGGATATTGTAGTCACTCAGCGTACGTCCATCCTC 468622 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 ||| || || || ||| | ||||| || || ||||| || ||||||||||| |||||||| Sbjct 468621 CAACTGCTTGCCGGCGAAAATCAAGCGCTGTTGGTCGGGGGGAATGCCTTCCTTATCTTG 468562 Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 ||||| || | || | || | |||||||| |||||||| || || || | |||| Sbjct 468561 GATTTTGGCCTTTA-CGTTGTCGATCGTGTCGGATGACTCGACCTCAAGCGTGATTGTTT 468503 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| | || || || ||||||||||| Sbjct 468502 TGCCGGTCAATGTCTTGACGAAAATTTGCAT 468472 >seq83 Length=277254 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 138380 GCACGCAAAGTTGGTGTGTAAACCTTCGTCGCGAGAGATAAGTTCGTTGCTAAACGTCAG 138439 ||| ||||||| ||| || | |||||||||||||| || || || ||| |||| ||| Sbjct 45490 GCATGCAAAGTCGGTATGAAGGCCTTCGTCGCGAGAAATGAGCTCATTGGAGAACGACAG 45431 Query 138440 CCCCGGCATGACGCCTTTGGTCTTGATGTAAAAGATGGCCGCGAAACTGCCCGaaaaaaa 138499 || ||||||| ||| |||||| | ||||||| ||||| |||||| ||||| Sbjct 45430 ACCAGGCATGAGGCCACGTTTCTTGAGCCAGAAGATGGAAGCGAATGAGCCCGAGAAAAA 45371 Query 138500 aaCGCCTTCGACAATAGCGAAAGCCACCATGCGC 138533 | ||| |||||| ||| || || || | |||| Sbjct 45370 GATGCCCTCGACAGCAGCAAAGGCAACAAGGCGC 45337 >seq107 Length=33973 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 || ||||| ||||| || ||||| | || ||| || | || || || ||| | Sbjct 818 TCTTTTTGAATATTGTAGTCGCTTAAAGTGCGGCCATCTTCAAGCTGCTTACCGGCGAAG 877 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 || | ||||| || ||||||||||||||||| || || |||||||| |||| || | Sbjct 878 ATAAGGCGTTGTTGATCCGGCGGAATGCCTTCCTTGTCCTGAATTTTGGCCTTGA-CGTT 936 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | ||| ||| | ||||||||||| || | || || || || || ||||| || Sbjct 937 GTCGATGGTATCGCTACTTTCGACTTCGAGCGTGATGGTCTTTCCAGTGAGGGTTTTCAC 996 Query 45329 AAAAATTTGCAT 45340 |||||| ||||| Sbjct 997 AAAAATCTGCAT 1008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002420294480