Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20globosa_20[genbank_20GCA_5F001264815.1_202015-08-11] 138 sequences; 8,938,591 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq83 111 2e-19 >seq83 Length=277254 Score = 111 bits (122), Expect = 2e-19 Identities = 406/633 (64%), Gaps = 2/633 (0%) Strand=Plus/Plus Query 48171 GGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATC 48230 |||||||| | |||||||| |||| || | || | |||| || | ||||| | | Sbjct 28615 GGACACATAAGAGACCAATCTTCATTCTTCTCGACACGCTTCATGAAAAGGTCTGGCACC 28674 Query 48231 CAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGT 48290 || | || | || ||||| | | | | || || || ||| || | ||| Sbjct 28675 CACATGGCCAGGAACAAATCGCGTGCGCGAACCTCGTCCTTTCCATGGTTTTTACGAAGA 28734 Query 48291 TCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGT 48350 || | || || | || ||||| |||||||| || | || || || | |||||||| Sbjct 28735 TCCACGAATTCAAATACATCAGGGTGCCATGGCTCCAGGTAAATGGCAAACGCACCTGGT 28794 Query 48351 CGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGG 48410 || ||||| || || || || | || | || || |||||| |||||| | ||| || Sbjct 28795 CGCTTATTGCCGCCCTGGTCGACGTAACGAGCCGTGTTGTTAAAAACTCGAAGCATGGGC 28854 Query 48411 ACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA 48470 || || ||||| || ||||| || || | ||| || || || ||| ||||| Sbjct 28855 ACGATTCCATTGCTTACTCCATTAGTGCCAGCAATGTACGAGCCTGTACCTCGGATATTG 28914 Query 48471 CTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTA 48530 || | ||| || ||||| ||| | || ||| | |||||| || || || Sbjct 28915 TGGATGTTTAGACCGATGCCACCAGCCGTCTTGCTTATCATGGCACACGTCTTGAGAGTG 28974 Query 48531 TCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGC 48590 || ||||| || || ||| || ||| ||||| | || || || ||||||||| Sbjct 28975 TCGTAAATGCCCTCAATAGAGTCTTCTTTCATAGACACTAAGAAGCACGACGACATTTGC 29034 Query 48591 GGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGAT 48650 |||| | || || | |||||||| || || |||||||| | || || || || Sbjct 29035 GGATTAGGCGTGCCAGCATTAAATAGAGTCGGCGATGCATGTGTGAATGCCTTTTCAGAC 29094 Query 48651 AACAATTTATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATAC 48709 | | || ||||| ||||| || || || || || | || || || | || || Sbjct 29095 ATGTAGTTGTATGTCTCAATGGCACTTTCAATGTCTTCACCG-TGAATTCCAACAGCGAC 29153 Query 48710 ACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGA 48769 |||||| | ||| | ||||| | ||| ||| ||| ||| || ||| || || || Sbjct 29154 ACGCATGAGCATGTGCTGAGGCCGTTCGGCAACTTTACCATTAATGCGCAAGAGGTAAGA 29213 Query 48770 TTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802 ||| | ||||| || ||||| ||||||| Sbjct 29214 GCGTTCTAGAGTTTTGAAGCCAAAGAAGTTGTA 29246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107830362320